| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1019 |
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| Symbol | |
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| ID | 8724749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1233576 |
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| End bp | 1234757 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003385869 |
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| Protein GI | 284035939 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000263626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TTCTTCTGAT TTATTTACTT CTGACAGTAC GGGTAACCTT CGCCCAAACA
GCCGTTGATG TTGACAAAGA ATTTGCCTTT GCAGCAAAGC AGTATGCATT AATGCTGAAA
AGCCATCCCG ATACAACCCG ATTTCCGCAG TCGACCAAGC CCGATGGAAC TCCCGACGAC
CGGAAGTCTG ATTGGTGGTG CAGCGGTTTT TTTGGCGGCT CACTCTGGCA TATTTACGAA
CGGACAAAAG ATCCGATGTG GAAAGAAGCG GCTAACAAAT GGACCATGGC CGTGGCAAAA
GAGCAATACA ATACGGGCAC GCACGACCTG GGCTTCATGC TATTCTGTCC GTTTGGTAAC
GGCTATCGGC TTACTAAAAA TGAGGCCTAC CCCCCTATTT TACTGACCGG TGCCAAGTCG
TTATCGACCC GCTTTGACCC TAAAGTGGGT GTGATCAAAT CCTGGAACAA ATTTCAGACG
TACGACTACC CTGTTATCAT CGATAACATG ATGAATCTGG AATTTCTTTT CTGGGCCGCT
AAACGATCAG GAAATAAAGA ATTTTACAAC ATCTCGGTCA CTCATGCCGA TAACACCATA
AAGAACCACT ATCGACCCGA CTACAGTAGT TATCACGTAA TCTGTTACAA TCCCGATGGA
ACGGTGGCCG CTAAGAAAAC GGCGCAGGGT TATGCCGATA ATTCAGCCTG GGCCAGAGGT
CAGGCGTGGG GATTATATGG CTTTACGGTC ATGTACCGGG AAACGAAAGA CAAAAAGTAC
CTGGAGCAGG CCCGTCATAT TGCCGATTTC TATCTGAATC ACCCTAATCT TCCCGCCGAC
AAGGTTCCGT ATTGGGATTT CAATGCCGCC AATATTCCGA ACGAAGAGCG CGATGCCTCT
GCAGCCGCTA TTACCTCGGC CGCCCTGCTG GAACTTTGTA CGTATGGCGG TCCATCGGCC
AAAACGTATT ACCAGGCAGC GGTAAAAATG CTGGAAAGCC TGTCAAGCCC GGCTTATAAG
GCCAACCTGG GTGAAAACAA CAACTTCATT CTGAAACATA GTGTAGGACA TAAACCGGCT
AAAAGTGAGG TAGATACGCC TATTATTTAT GCGGACTACT ATTATCTGGA AGCTCTTCTA
CGGTATGATG CGCTGCGCAA AAAGAACGCA TTCCGGTCGT AG
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| Protein sequence | MKRFLLIYLL LTVRVTFAQT AVDVDKEFAF AAKQYALMLK SHPDTTRFPQ STKPDGTPDD
RKSDWWCSGF FGGSLWHIYE RTKDPMWKEA ANKWTMAVAK EQYNTGTHDL GFMLFCPFGN
GYRLTKNEAY PPILLTGAKS LSTRFDPKVG VIKSWNKFQT YDYPVIIDNM MNLEFLFWAA
KRSGNKEFYN ISVTHADNTI KNHYRPDYSS YHVICYNPDG TVAAKKTAQG YADNSAWARG
QAWGLYGFTV MYRETKDKKY LEQARHIADF YLNHPNLPAD KVPYWDFNAA NIPNEERDAS
AAAITSAALL ELCTYGGPSA KTYYQAAVKM LESLSSPAYK ANLGENNNFI LKHSVGHKPA
KSEVDTPIIY ADYYYLEALL RYDALRKKNA FRS
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