Gene Slin_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1004 
Symbol 
ID8724734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1220034 
End bp1221119 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385854 
Protein GI284035924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.546188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.659608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTAA CACTATTCAT TATTACCGGG TTGATTGCCA GCACCTTCCT TTTCATGCAA 
CAAAGCACCT TTGGGAGCAA CCCGACCGCC ACCCGACTGG ACCGAATTAA CCGCTCACCA
AATTACCGTG ATGGCGCTTT TCAAAACCTG GAAAAAACCG AAGTCATGCG TGAAGATGCC
TCTTACGTGG GTATGATGCG CGATTTCTTT AATAAAGCAC CCGATAACAT ACCACCCAAA
CCGTTACCCT CTGTTCGGAC TGACCTCAAA GCCCTTTCAG ATTCCGTTCC CACCATCGTC
TGGTTTGGTC ATTCTTCCTA TCTCATCAAA TCAAGAGGGG TTACTATTCT CGTTGACCCT
GTTTTTAGCG GAAACGCGTC GCCCGTTTCG TTTTTCGGCA AGGCGTTCCC GGGTTCCGAT
GTATACAAAG TGGAAGACAT GCCGGATATT GACATGCTGG TACTATCCCA CGACCACTAC
GACCACCTGG ATTACTTAAC GATCAAGAAG CTTATTCCCC GAGTCAAAAA GTTTTATACA
GCGCTTGGCG TAGGGGCTCA CCTTGAACGC TGGGGTGCCT CCCCCGATCA GATCATTGAA
TTTGATTGGT GGGAAAGTCA TCATGTTGCC ACCGATATTG ACATGACGGC AGTACCCGCC
CGCCACTTTT CGGGTCGCAG TATCACACGG GGCAAAACGC TGTGGACCGC TTTTGCGCTA
AAGCTTCACG GTTATTCGCT GTATCTGGGT GGCGATTCAG GCTACGGCAA GCACTTCAAA
GAAATCGGCG ATAAATACGG CCCGTTCGAT CTAGCCATCC TCGAATGCGG GCAGTACGGG
AAAGACTGGC CCAATATTCA CATGTTTCCC GAAGAGGTAG TCACGGCCGC ACAGGACCTG
CATGCCAAAA CGGTTTTGCC CGTTCACTGG GCTAAATTCT CCCTTTCCGT TCACGGCTGG
AAAGAGTCGG TTGAACGGTT TACCAAGCGA GCCGCCGAAC AAAAACTGGA CGTTACCACC
CCTCTGATTG GGGAGCCATT GTCAGTAGGT GTTAACTACC CTAAATCAGT TTGGTGGAAT
TACTAG
 
Protein sequence
MLLTLFIITG LIASTFLFMQ QSTFGSNPTA TRLDRINRSP NYRDGAFQNL EKTEVMREDA 
SYVGMMRDFF NKAPDNIPPK PLPSVRTDLK ALSDSVPTIV WFGHSSYLIK SRGVTILVDP
VFSGNASPVS FFGKAFPGSD VYKVEDMPDI DMLVLSHDHY DHLDYLTIKK LIPRVKKFYT
ALGVGAHLER WGASPDQIIE FDWWESHHVA TDIDMTAVPA RHFSGRSITR GKTLWTAFAL
KLHGYSLYLG GDSGYGKHFK EIGDKYGPFD LAILECGQYG KDWPNIHMFP EEVVTAAQDL
HAKTVLPVHW AKFSLSVHGW KESVERFTKR AAEQKLDVTT PLIGEPLSVG VNYPKSVWWN
Y