| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0982 |
|---|
| Symbol | |
|---|
| ID | 8724712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1196424 |
|---|
| End bp | 1197086 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003385832 |
|---|
| Protein GI | 284035902 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.452379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC TTCTTCAAAC GACCGATATA CGCCGAAATT ACGGCGATCT TCCTGTACTT
AAAGGCATAA ATTTATCCAT CGAATCCGGG GAAGTAGTTT CCATCGTGGG TGCATCGGGT
GCTGGTAAAA CAACGCTGCT TCAGATTCTT GGTACACTCG ATCGGCCTGA CTCCGGTACA
TTACATATTG CCGGACAAAA TGTGTTCACG CTCAACGACC GGCAACTCGC ACAGTTTAGA
AATGAGCGTA TTGGGTTTGT TTTCCAGTTT AACAACCTCC TGCCCGAATT TACAGCGCTG
GAAAATGTGT GTTTGCCGGG GTTTATCGCT GGCAAAGATG AACGGGCTGT TCGACAACGT
GCTCAGGAAT TACTGACAAC ACTCGGTTTA GAACATCGTC TGACGAATCT ACCGTCACAA
TTATCGGGAG GAGAACAGCA ACGTGCTGCG GTAGCGCGCG CGCTGATTAA TGAACCTGCT
ATCGTCTTCG CCGATGAACC CAGCGGAAAC CTTGATTCGC GCAACGCCGA AGAACTGCAC
CAACTGTTTT TTAGGCTCCG CGACGAACTC GGGCAAACAT TCATAATAGT GACACATAAC
GAAGCGCTGG CATCCCTCGC CGACCGAACT GTGACGATTC GGGATGGACT TTTGTTTACG
TAA
|
|---|
| Protein sequence | MSSLLQTTDI RRNYGDLPVL KGINLSIESG EVVSIVGASG AGKTTLLQIL GTLDRPDSGT
LHIAGQNVFT LNDRQLAQFR NERIGFVFQF NNLLPEFTAL ENVCLPGFIA GKDERAVRQR
AQELLTTLGL EHRLTNLPSQ LSGGEQQRAA VARALINEPA IVFADEPSGN LDSRNAEELH
QLFFRLRDEL GQTFIIVTHN EALASLADRT VTIRDGLLFT
|
|---|
| |