Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0974 |
Symbol | |
ID | 8724704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1187897 |
End bp | 1188469 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003385824 |
Protein GI | 284035894 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.082273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0344411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACG AAGAAATCCT CGTTAAATAC CGCGACCCGT CGAGCCGGAA CTACGCCTTT AATCTGCTGG TACGCAAGTA TCAGCAGAAA ATCTATTGGC ATATCCGCAA AATGGTCATT GACCACGACG ATGCTGATGA TTTAGTGCAG GAAACCTTCA TAAAAGTCTG GAATAGCCTG GAACAGTTTC GGGGTGATAG TCAGTTATAT ACTTGGGTAT ACCGTATTGC GACCAACGAA TGCCTTAACT TCCTGAATAA AAAACGCCGA CGGTTTTTCC TACCTATCGG CGATGTAGAA GGCGAGTTGA TGGAAAAGCT GGAAAGCAAC GCTGCCTATG TTACGTCGGG TAGTGAGCCA AGTGGAGAAG AAGTACAGAT GAAACTCCAG AAGGCACTTC TTAAACTTCC TGATAAGCAG CGACTAGTGT TCAACATGAA GTACTTCGAT GATATGAAGT ATGAAGAGAT TTCGGAGATT ACTGGTACAT CAGTAGGAGC GCTGAAAGCT TCATACCACC TGGCAGTCAA AAAAATCGAG GATTTTATCA CGAAAACTGA TACAACTGAT TAA
|
Protein sequence | MTDEEILVKY RDPSSRNYAF NLLVRKYQQK IYWHIRKMVI DHDDADDLVQ ETFIKVWNSL EQFRGDSQLY TWVYRIATNE CLNFLNKKRR RFFLPIGDVE GELMEKLESN AAYVTSGSEP SGEEVQMKLQ KALLKLPDKQ RLVFNMKYFD DMKYEEISEI TGTSVGALKA SYHLAVKKIE DFITKTDTTD
|
| |