Gene Slin_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0968 
Symbol 
ID8724698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1180108 
End bp1181325 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385818 
Protein GI284035888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0260855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA CGTCAACACT CAGTGTCATT GAAAAAGCAT TAGAACAAGG GAAGGGGGTT 
TTACGGCTGA CCCCAACCTG GGTACCCCGG TCGTTTTGCG TTCCAGGCCG TCGAATCAAA
TTGCACCCGG ATGATTATTA TGTGCTGGGT GGCGAGCGGG GCGGTATCGA TGAACGCTGG
TTCTCGTCGA CCACACCCGC CAAAAATGGT CCGCTTACGG GCGAAAACGA AGGGTTGAGT
CATGTTGTCT TTAACGACAA CGGACAGGAA GTTCAGTTCC TGCTGAAAGA TGCCGTGAAT
GAATTGAAAG GCGAACTCAT CGGCGATCGT TTATGGAATG AATACCAGGC CTGGCCTATG
TACTCCAAGT TTTTTGATAA CATGGGTCCG TTGCCGCATC ATCTGCATCA CAACGATGAG
CAGGCAGCCC TGATTGGTCA GTTGGGAAAA CCCGAGGCCT ATTATTTTCC GCCACAAGTC
AACAATCACG GTGGCGATTT TCCTTACACA TTCTTTGGTA TCGCGCCGGG CACGTCGAAA
GAGCAAATAA AGGAGTGCCT GCAAAACTTC ACGAAAGGCG ATAACAAGAT TACTAACTAT
TCATCGGCTT ACCGGCTGGA GCCGGGAACG GGCTGGGATG TTCCACCGGG TTTGCTCCAT
GCCCCCGGCA GCATGTGTAC CTACGAGCCT CAGAAAGCGT CGGACGTGTT CGCCATGTAC
CAGTCGCTGG TAAATGAAGC CATCATTCCC GAAGAATTAT TGTGGAATGG TACACCCAAA
GATCGTATTG GCGACTATGA CCAGTTGATG GAAGCCATCG ACTGGGACCT GAACGTCGAT
CCGCAAATGA TGGCCAATCG GTTTATGAGA CCCAAACCCG TACGGCCCCT GGAGGAAATG
GAAGGCTACG TTGAAACCTG GGTTTGCTAC AAATCCGATG CGTTCAGTGC CAAAGAACTT
ACTGTATTGC CGGGCCAAAC GGTCACTATT AAAGACAGCG CGGCTTATGG TCTGATCATG
ATGCAGGGGC ACGGCAAACT GAACGATTGG AACATCGAAA CGCCAACGAT GATCCGGTAT
GGCCAGCTGA CGAATGATGA ATTCTTCGTG AGCGAAAAAG CGGCTATGGA AGGCGTAACC
ATCGTTAATG CCTCGTCGAC CGATCCCATT GTCATGCTAA AACACTTTGG TCCCGGAAAC
CCTGATTTAG TATTATAA
 
Protein sequence
METTSTLSVI EKALEQGKGV LRLTPTWVPR SFCVPGRRIK LHPDDYYVLG GERGGIDERW 
FSSTTPAKNG PLTGENEGLS HVVFNDNGQE VQFLLKDAVN ELKGELIGDR LWNEYQAWPM
YSKFFDNMGP LPHHLHHNDE QAALIGQLGK PEAYYFPPQV NNHGGDFPYT FFGIAPGTSK
EQIKECLQNF TKGDNKITNY SSAYRLEPGT GWDVPPGLLH APGSMCTYEP QKASDVFAMY
QSLVNEAIIP EELLWNGTPK DRIGDYDQLM EAIDWDLNVD PQMMANRFMR PKPVRPLEEM
EGYVETWVCY KSDAFSAKEL TVLPGQTVTI KDSAAYGLIM MQGHGKLNDW NIETPTMIRY
GQLTNDEFFV SEKAAMEGVT IVNASSTDPI VMLKHFGPGN PDLVL