| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0967 |
|---|
| Symbol | |
|---|
| ID | 8724697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1179025 |
|---|
| End bp | 1180086 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003385817 |
|---|
| Protein GI | 284035887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0252662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCAAC AATCCTGGAC AGACAAAGTA TCCAACCCAG CCCAAATCGG CGGTATCGAA
ACATCCATTC TCGACAATGG AACTGGCCGG GGCACTCGTA TCGCGTGGAT AAATACCGGC
ACCGGCCTAC GCTATAAAGT CGTCATTGAC CGGGCTATGG ACATTGCCGA TGCTTTTTTC
AATCAACATA GCCTGGCCTG GCTCAGCCAT ACGGGCATTA CGCCCCCTCA GCCACTCTCC
GACAAGGGGG CAGACTGGCT CCGTACATTT GGGGGTGGAT TGCTTACTAC CTGCGGCCTC
TCGCATGTGG GTGGCCCCGA GCAGGATGCT TTTGGCGAGC GTGGGTTGCA CGGGCAGATA
AGCAACAGCC CGGCCGAAAT CGAATCCATT ATTCAGCCCG ACCCACTTAG GGGACAATTG
GAGATGAGCA TAACCGGCCG GATTAAGGAA ACCAAAATAT TCGGTCCCAG TCTGGAGTTG
CGACGCACTA TTTCCGGAAC GCTCGGGCAG CCCTTCATTC GAATTCACGA CGAAGTCATA
AACCGGGCCA ATACACCGGC ACCTCACATG CTGCTGTACC ATTTTAATTT CGGTTGGCCA
TTAGTCGATG AAGGGACAGA TATTATCTGG AAAGGCAACT GGCAGGCGCG GGAAGGGGGA
ATCAATGCGG ATATCTTCCA CGAAGGCAAC GACTTTCGTA AATGCCCGGC ACCTTTGGAT
ACGCACGGTG GTACGGGCGA AGCCGTGGCT TCCATTGATA GTACGCCCGA CAGTTCTGGG
CAATGTACAG CCGGTTTGCA TAACGCTCAA CTGGGCATGG CCGTAGCCTT ACGGTTCCGG
AAAGATCAAT TGCCCTGGCT CATTAATTGG CAACACTGGG GAAAAGGTGA GTACGTCACG
GGTTTGGAGC CCACAACCAA TCCACTTATT GGCCAGGCAA AAGCGCGTGA ACAAAACGAA
CTCATTTTCC TGAAATCAGG AGAAACGAGG TATTACGACC TTGAATTAGA AATTTTACAT
GAGAAAGTAA CAATTGCTGA CTTTCTTGCC AAACAACTCT AG
|
|---|
| Protein sequence | MTQQSWTDKV SNPAQIGGIE TSILDNGTGR GTRIAWINTG TGLRYKVVID RAMDIADAFF
NQHSLAWLSH TGITPPQPLS DKGADWLRTF GGGLLTTCGL SHVGGPEQDA FGERGLHGQI
SNSPAEIESI IQPDPLRGQL EMSITGRIKE TKIFGPSLEL RRTISGTLGQ PFIRIHDEVI
NRANTPAPHM LLYHFNFGWP LVDEGTDIIW KGNWQAREGG INADIFHEGN DFRKCPAPLD
THGGTGEAVA SIDSTPDSSG QCTAGLHNAQ LGMAVALRFR KDQLPWLINW QHWGKGEYVT
GLEPTTNPLI GQAKAREQNE LIFLKSGETR YYDLELEILH EKVTIADFLA KQL
|
|---|
| |