| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0962 |
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| Symbol | |
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| ID | 8724692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1170301 |
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| End bp | 1173483 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003385812 |
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| Protein GI | 284035882 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000104088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00653561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTATGG CCATGGTGAT TGCAGAGTCA TTCGCAAGTT CTGCAAAACA ACCTAATGGG
GGCCTTTCTA AAGACGGGCG GTCTGTTAGT GCGCTGGTAG CTATCAACGC TCCGGATCGT
TTGGCAGAGG CCGCGACGGA CATTACCGTG TCAGGTAAAG TAATTGATGA GAAAGGTGAT
GGGTTGCCCG GCGTAAGTGT TGTTATAAAA GGGTCAACAC AAGGGACAAC TACAGACGGA
ACAGGAAGCT TTAAAATTTC CGTTCCCAAC GCCAATTCAA CGCTGGTTTT TAGCTTTGTC
GGGTATGCGC GAAAAGAAGC CGTTGTGGGT GGCCAAACCA CACTTACCGT AACACTAACG
CCCGATGACC AAACCTTAAA TGAAGTTGTG GTAGTTGGTT ATGGTAGCCA GTTAAAAAAG
GAAATAACGG GGGCTGTTCA GACAGTAAGT GCCGCAGAAA TCAAAGATCT TCCTGTTTCC
CAGATTGGCC AGAAATTACA GGGCCGGCTG GCGGGTGTTC AAATCAACCA GGCTACTGGT
AAGCCGGGTC AGGGAATAAG CATCCGTATT CGCGGTCAGG TATCCGTTTC GGCGGGTAGC
GACCCGCTTT ATGTAGTGGA TGGTTTCCCC ATAACGGGAA ATATTGCCCA GCTTAACCCC
GACGAAATCG AAGATCTTTC TGTGTTGAAA GACGCTGCTT CGACCTCGCT GTACGGTTCG
CGGGCGGCCA ACGGAGTTGT GCTGATTACC ACTAAAAAAG GTAAGCCCGG TCAGACAAAT
ATTAGCTTCA GCGCGTTTGC AGGTGTCCAG AAAGTTCCCA TGCGAGGTCG CGTGAAGATG
CTGGATGCCG TTCAGTTTGC CCAGTTCAAA AAGGAATATT ACGAAGATCA GGGGCAAGCT
GTGCCGGTTG AGTTCCAGAA TCCGTCGCAG TACGAAGGTA AAAACAACGA CTGGTATGAT
GCTTTGCTGC GGCAGGCACC TCTTCAGAGC TACAATCTGA GTATCTCTAA CAATACAGGT
AAGGCTAATA CATCGTTGGT TGCCGGTATC TTCAATCAGG ATGGGGTTGT ACTGAACAAT
AAATACAAAC GGTATTCACT GCGCCTGAAC TCAAACTATA ACCTGTCTGA CCGCGTAACG
ATCGGCTTTA ACGTGGCCCC TTCGTACGTG TACGACAATA CCCCCCGGAC GGATGGTGAC
CGGGGAACCG GAATTCTGTT CAACGCCCTG CACACCTGGC CAGTAATGCC CATTTATGCC
GCCAATGGTG AACTGACCAA GTTCAATACT TTTCCGGGTA GTACGGGTAA TATTTTCCAG
TATCCTAACT GGGTGCGGGC CGCTAATGAA CTGGTCAATG AAACCAAGAA CACAAACCTG
CTGGCAAATG CGTATGTACA ATATCGGCCG ATTACTGGGT TAACGTTACG GTCGACGATG
AATATCGAGT ATCAGAACTC TAAGTTCTTC TTCTTTAACC CGTCGACGGC TACGAGTGCC
ATCAACGTGC CAATCCCAAC AACGGCCGTT TCTATTCGGC AGGGGCTGGA GAACACATCC
TGGCTGAACG AAAACCTGGC TACCTATACC CGCAGCTTTA ACGATCATAA CTTTGAGTTG
CTGGCTGGTT TTACCAACCA GTGGTATCGG CAGGAGTTCA ACCGTATTCA GGCCGATACG
TATGCCGATG ATCGGCTTCC TACCATTCAG GGAGCACTCA ACATCAACCG CGGTGGTACA
AACAACGGTA TCAACCAGTG GGCATTAACC TCCTATCTGT CTCGTCTGAC CTATAATTAC
AAAGGAAAAT ACCTGTTTAC GGCAGCTGTC CGGTCTGATG GCTCGTCCCG ATTTGGCGCG
AACAATCAGT ACGGTACATT CCCGTCGGCT TCGGTAGGTT GGGTACTTTC TGATGAAAAC
TTCATGAAAA CAGTTATGCC TGTTTCGTTT GCTAAGGTTC GGGCTAGCTA CGGCGTAATT
GGTAACAATA ACATTGGTAA CTACACCTCC TACGCCCTGG TGAACAACAC TACAAACGCC
GTGTTCGGTA GCACGGTTGC TACGGGAGCG GTCGTTCGAT CGTTGGCTAA TCCAAATCTG
GGCTGGGAAA CGACCAAACA ATTTGATATA GGGCTTGACC TGGGTCTGTT GAACGACCGT
ATCCAGTTCA TTTACGATTT CTACACGAAG CGGACAACCA ATCTGCTTTA CGCTGTACAA
ATTCCGCAGG AGTCGGGTTT CACAAACTTC AATGACAACA TTGGCGAAAT CAAGTTCTGG
GGCCATGAAT TCTCGCTGAC AACCAAAAAC ACGACGGGTC GGCTGAAATG GAATACCAAT
GCGAACATCT CGTTCAACCG CAATCTGGTT GTGGCGCTGG CTCCGGGTAT TGACCGGGTG
TATGGTTCGT TCCACATTAC GCAGGTGGGT AAGCCCTTTG GCCAGTTCTA TGGTCTGATC
AAAGAAGGAT ACTATCAGAG TGCTGAAGAA CTCCGATCAT CACCGATCAT TCCGGGCCGT
TCAGCCATTG GCACCATCAA AATGAAAGAT GTGAACGGCG ACGGTGTGAT TACCTACGGT
GGTGATGCCG ATGATCGCAC CATAATTGGT AGCCCATTCC CAAAATTCAC CTACGGTATT
ACCAACGACC TGAAATACGG CAACTTTGAT TTCTCAATTA CGGGCTCTGG TTCGTATGGC
AATCAGTTAT GGGTTCGCCA TTTGTACAGC ACCGCCAACC TGGACGCTGT ATTTAACATG
GTTGAGGGTG TAAAGGACCG TTTCCGCGTT CAAAACGTCG TGACGAATGG TGTTGGTGTG
GCTACTAAAG TAATAACACC AGGAGCCGGT CAGTTTGGCG CAACCAACAA TGGCGGGAAC
TTTACGGGTA TTGAGCGTGA CTGGAACAGT ACGCAATTCC TGGCTGATGC CTCTTTCTTT
ACCATCAAAA ATATAACGCT TGGCTATAAC ATTGGAGCAG TCAATAAGCT CTTCAAGTCG
GCACGTTTAT ATGCTTCGGC TCAGCAGGTC TATATATTCA CGAAATACTG GGGTGGTCCA
AACCCGGAGA CCAGCGGCAA CGGAGCTGGC GATGGTGACG GTGGTAACCT AAGCCAGGGA
GTTGACTTCT CGAACTATCC GGTTCCACGT ACCTACACAC TTGGCGTTAA CCTGAACTTT
TAA
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| Protein sequence | MAMAMVIAES FASSAKQPNG GLSKDGRSVS ALVAINAPDR LAEAATDITV SGKVIDEKGD
GLPGVSVVIK GSTQGTTTDG TGSFKISVPN ANSTLVFSFV GYARKEAVVG GQTTLTVTLT
PDDQTLNEVV VVGYGSQLKK EITGAVQTVS AAEIKDLPVS QIGQKLQGRL AGVQINQATG
KPGQGISIRI RGQVSVSAGS DPLYVVDGFP ITGNIAQLNP DEIEDLSVLK DAASTSLYGS
RAANGVVLIT TKKGKPGQTN ISFSAFAGVQ KVPMRGRVKM LDAVQFAQFK KEYYEDQGQA
VPVEFQNPSQ YEGKNNDWYD ALLRQAPLQS YNLSISNNTG KANTSLVAGI FNQDGVVLNN
KYKRYSLRLN SNYNLSDRVT IGFNVAPSYV YDNTPRTDGD RGTGILFNAL HTWPVMPIYA
ANGELTKFNT FPGSTGNIFQ YPNWVRAANE LVNETKNTNL LANAYVQYRP ITGLTLRSTM
NIEYQNSKFF FFNPSTATSA INVPIPTTAV SIRQGLENTS WLNENLATYT RSFNDHNFEL
LAGFTNQWYR QEFNRIQADT YADDRLPTIQ GALNINRGGT NNGINQWALT SYLSRLTYNY
KGKYLFTAAV RSDGSSRFGA NNQYGTFPSA SVGWVLSDEN FMKTVMPVSF AKVRASYGVI
GNNNIGNYTS YALVNNTTNA VFGSTVATGA VVRSLANPNL GWETTKQFDI GLDLGLLNDR
IQFIYDFYTK RTTNLLYAVQ IPQESGFTNF NDNIGEIKFW GHEFSLTTKN TTGRLKWNTN
ANISFNRNLV VALAPGIDRV YGSFHITQVG KPFGQFYGLI KEGYYQSAEE LRSSPIIPGR
SAIGTIKMKD VNGDGVITYG GDADDRTIIG SPFPKFTYGI TNDLKYGNFD FSITGSGSYG
NQLWVRHLYS TANLDAVFNM VEGVKDRFRV QNVVTNGVGV ATKVITPGAG QFGATNNGGN
FTGIERDWNS TQFLADASFF TIKNITLGYN IGAVNKLFKS ARLYASAQQV YIFTKYWGGP
NPETSGNGAG DGDGGNLSQG VDFSNYPVPR TYTLGVNLNF
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