Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0961 |
Symbol | |
ID | 8724691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1167844 |
End bp | 1170033 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385811 |
Protein GI | 284035881 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000466384 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0803995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC GGCTGGTCAA GTTCGCAGAA CAGGGAGTAT TTGTTCTGGT CATCTTCATT CTGTTCATCC TGCTTTTTAG TGACAGGATT GTTGTGCCTG TCTGGCTGCA ACCTGTGGGA CGTATGCACC CGCTGTTTCT TCATTTTCCC ATTGTGATTT TATTGCTGGC GATGGTTATG GAAGCCTTTC GCTTCCGAAC TACAACGGCC GAAAATCGGG TGGAGGCTTC GGTTTTTTAC CAGGACTTCC TGGCCAATTT ACTGCTCATT GGCACCCTGC TGGCTGGTCT TACGGTTATC ATGGGGCTGT TCCTGGCGCA GGAAGACGGG TATTCCGGTC AGGTGTTATT TTGGCATAAA TGGTCGGGCG TTGGTATTTT CTTCGCATCG GCACTGGTGT ACACCATCCG AAACAAAGTC TGGTATAACG CCCTGATTGC CCGGGTGGGA GCGCTCGCCA CAATCGTTTG TCTGGTTGGC GCTGGGCATT ACGGGGCAAC GCTAACCCAC GGCGACAATT TTCTCTTTGC GCCGATAAGT AATGAACTGA AACCAACCCC CGTTTCGCTC GACCAGGCGC TGGTGTTCAA CGATGTAATA CAGCCGATTT TCGAGCAGAA ATGCGTTAGC TGTCATAACC CCGGCAAATT GAAAGGGGAG CTGAATCTGA CCAGCATGGA GTCGATACTG AAAGGTGGCA AAAGCGGTAA GTTATTTGTG GCCGGTCAGC CTGCGGTTAG TTTGCTGTTG CAGCGGATTC ACCTGCCATC CGACGAAAAA AAGCACATGC CACCGCTGGG AAAGAGCCAG CTTACACCCC AGGAAATGAC CCTGCTGGCA TTGTGGGTAA AAGGCCGCGC CGACTTTCAG AAGAGAGTGG TCGATTTACC CGCCACCGAT TCGTTACGCT TCATCGCGTC GGCTCTGTTC AAACCCGTTC AGTCGGTTGA AACGTTTGAA TTTGACGCTG CCGATGAGGA GACCGTTACG AAGCTGAACG ACGATTACCG GACTGTTGCT CCGCTGGCGA AAGAGTCGCC CGCGCTGGCT GTCAATTTGT ACAATCGAGC AGCTTACAAA CCGGAGAAGC TCGACGAACT GGATGCCGTA AAAGAGCAGA TCGTTTACCT GAACCTCAAT AAAATGCCCG TGACCGATGC GGCCCTGCGG CAAATTCGGA AGTTTGAAAA TTTGCAAAAG CTGGATTTGA ATTTTACGGA TATTACGGGC AACGGCATAG CTGAACTTAC CTCTCTGGAC CACTTAAAGA CGTTGTCGCT GGCGGGAACG AAGGTCACGT TCGCCGATCT ACAAAAGCAG ATTGGTGCGT TTAAATCCCT GAAAACCTTA GCTGTCTGGA ACACAGCACT AACGCCTGCA CAAATCACAC AATTGCAAAA AGAGCACAAA AACATCCAGT TTATCGGTGG GTTCGATGGT ACAGCCAGTG AGCCAATCAA ACTGAATCCG CCACAAATTA AAAACAGCTC TACCATCTTT AACAAGACGC TGGCTCTGCA CTTAAAACAC CCTATTCGGG ATGTTCAGCT TCGTTTCACT ACCGACGGTA GCGAGCCCGA CAGCATCCAC TCACCTCTGT TTACGGGTCA GACGGTCCTG GATAAACCGA CCGTGATTAA AGCCAAAGCC TATAAACAGG GCTGGTTCAG TAGTGATGTG GCTACGTTTA GCTTTTATAA GGGTTCTTAC ATACCGGATA GCGTAAATTT ATTATTGCCG CTTAATCCGG TTCATCAGGC CGATGGGGCA CACACTTTTT TCGATGGTAA ACTAGGCACC TTCAACGCCA ATAGTCCGGC CTGGGCTAAC AACTGGGCGG GGTTCCGAAA GAACGAAATG GCGCTGGTGT CAGAATTCAA GAAGCCGGTT AGTGTAAGTT CGGTAGCTCT GCGGATCATG GTCGAGGAAG AAACGAGTAT TTTCCCTCCA GGTCTGGTTG AAGTGTGGGG TGGACCCAGC CGCACGCAGA TGAAACGACT TGGTACACTC AAACCTGATC TTCCGGCCAA AAAAAGTACC CACGAACTGA AAGCGATCAC CTGTACATTT CCCCCACACA CTATTTCGTA CCTGAAAATT GTGGCGTACC CGCTTAAACA AATCCCGGAA TGGCACCCGA ACAAAGGAAA TACCGCCTTG TTGCTGGTAG ATGAAGTATT CATCAATTAA
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Protein sequence | MNKRLVKFAE QGVFVLVIFI LFILLFSDRI VVPVWLQPVG RMHPLFLHFP IVILLLAMVM EAFRFRTTTA ENRVEASVFY QDFLANLLLI GTLLAGLTVI MGLFLAQEDG YSGQVLFWHK WSGVGIFFAS ALVYTIRNKV WYNALIARVG ALATIVCLVG AGHYGATLTH GDNFLFAPIS NELKPTPVSL DQALVFNDVI QPIFEQKCVS CHNPGKLKGE LNLTSMESIL KGGKSGKLFV AGQPAVSLLL QRIHLPSDEK KHMPPLGKSQ LTPQEMTLLA LWVKGRADFQ KRVVDLPATD SLRFIASALF KPVQSVETFE FDAADEETVT KLNDDYRTVA PLAKESPALA VNLYNRAAYK PEKLDELDAV KEQIVYLNLN KMPVTDAALR QIRKFENLQK LDLNFTDITG NGIAELTSLD HLKTLSLAGT KVTFADLQKQ IGAFKSLKTL AVWNTALTPA QITQLQKEHK NIQFIGGFDG TASEPIKLNP PQIKNSSTIF NKTLALHLKH PIRDVQLRFT TDGSEPDSIH SPLFTGQTVL DKPTVIKAKA YKQGWFSSDV ATFSFYKGSY IPDSVNLLLP LNPVHQADGA HTFFDGKLGT FNANSPAWAN NWAGFRKNEM ALVSEFKKPV SVSSVALRIM VEEETSIFPP GLVEVWGGPS RTQMKRLGTL KPDLPAKKST HELKAITCTF PPHTISYLKI VAYPLKQIPE WHPNKGNTAL LLVDEVFIN
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