Gene Slin_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0961 
Symbol 
ID8724691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1167844 
End bp1170033 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385811 
Protein GI284035881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000466384 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0803995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GGCTGGTCAA GTTCGCAGAA CAGGGAGTAT TTGTTCTGGT CATCTTCATT 
CTGTTCATCC TGCTTTTTAG TGACAGGATT GTTGTGCCTG TCTGGCTGCA ACCTGTGGGA
CGTATGCACC CGCTGTTTCT TCATTTTCCC ATTGTGATTT TATTGCTGGC GATGGTTATG
GAAGCCTTTC GCTTCCGAAC TACAACGGCC GAAAATCGGG TGGAGGCTTC GGTTTTTTAC
CAGGACTTCC TGGCCAATTT ACTGCTCATT GGCACCCTGC TGGCTGGTCT TACGGTTATC
ATGGGGCTGT TCCTGGCGCA GGAAGACGGG TATTCCGGTC AGGTGTTATT TTGGCATAAA
TGGTCGGGCG TTGGTATTTT CTTCGCATCG GCACTGGTGT ACACCATCCG AAACAAAGTC
TGGTATAACG CCCTGATTGC CCGGGTGGGA GCGCTCGCCA CAATCGTTTG TCTGGTTGGC
GCTGGGCATT ACGGGGCAAC GCTAACCCAC GGCGACAATT TTCTCTTTGC GCCGATAAGT
AATGAACTGA AACCAACCCC CGTTTCGCTC GACCAGGCGC TGGTGTTCAA CGATGTAATA
CAGCCGATTT TCGAGCAGAA ATGCGTTAGC TGTCATAACC CCGGCAAATT GAAAGGGGAG
CTGAATCTGA CCAGCATGGA GTCGATACTG AAAGGTGGCA AAAGCGGTAA GTTATTTGTG
GCCGGTCAGC CTGCGGTTAG TTTGCTGTTG CAGCGGATTC ACCTGCCATC CGACGAAAAA
AAGCACATGC CACCGCTGGG AAAGAGCCAG CTTACACCCC AGGAAATGAC CCTGCTGGCA
TTGTGGGTAA AAGGCCGCGC CGACTTTCAG AAGAGAGTGG TCGATTTACC CGCCACCGAT
TCGTTACGCT TCATCGCGTC GGCTCTGTTC AAACCCGTTC AGTCGGTTGA AACGTTTGAA
TTTGACGCTG CCGATGAGGA GACCGTTACG AAGCTGAACG ACGATTACCG GACTGTTGCT
CCGCTGGCGA AAGAGTCGCC CGCGCTGGCT GTCAATTTGT ACAATCGAGC AGCTTACAAA
CCGGAGAAGC TCGACGAACT GGATGCCGTA AAAGAGCAGA TCGTTTACCT GAACCTCAAT
AAAATGCCCG TGACCGATGC GGCCCTGCGG CAAATTCGGA AGTTTGAAAA TTTGCAAAAG
CTGGATTTGA ATTTTACGGA TATTACGGGC AACGGCATAG CTGAACTTAC CTCTCTGGAC
CACTTAAAGA CGTTGTCGCT GGCGGGAACG AAGGTCACGT TCGCCGATCT ACAAAAGCAG
ATTGGTGCGT TTAAATCCCT GAAAACCTTA GCTGTCTGGA ACACAGCACT AACGCCTGCA
CAAATCACAC AATTGCAAAA AGAGCACAAA AACATCCAGT TTATCGGTGG GTTCGATGGT
ACAGCCAGTG AGCCAATCAA ACTGAATCCG CCACAAATTA AAAACAGCTC TACCATCTTT
AACAAGACGC TGGCTCTGCA CTTAAAACAC CCTATTCGGG ATGTTCAGCT TCGTTTCACT
ACCGACGGTA GCGAGCCCGA CAGCATCCAC TCACCTCTGT TTACGGGTCA GACGGTCCTG
GATAAACCGA CCGTGATTAA AGCCAAAGCC TATAAACAGG GCTGGTTCAG TAGTGATGTG
GCTACGTTTA GCTTTTATAA GGGTTCTTAC ATACCGGATA GCGTAAATTT ATTATTGCCG
CTTAATCCGG TTCATCAGGC CGATGGGGCA CACACTTTTT TCGATGGTAA ACTAGGCACC
TTCAACGCCA ATAGTCCGGC CTGGGCTAAC AACTGGGCGG GGTTCCGAAA GAACGAAATG
GCGCTGGTGT CAGAATTCAA GAAGCCGGTT AGTGTAAGTT CGGTAGCTCT GCGGATCATG
GTCGAGGAAG AAACGAGTAT TTTCCCTCCA GGTCTGGTTG AAGTGTGGGG TGGACCCAGC
CGCACGCAGA TGAAACGACT TGGTACACTC AAACCTGATC TTCCGGCCAA AAAAAGTACC
CACGAACTGA AAGCGATCAC CTGTACATTT CCCCCACACA CTATTTCGTA CCTGAAAATT
GTGGCGTACC CGCTTAAACA AATCCCGGAA TGGCACCCGA ACAAAGGAAA TACCGCCTTG
TTGCTGGTAG ATGAAGTATT CATCAATTAA
 
Protein sequence
MNKRLVKFAE QGVFVLVIFI LFILLFSDRI VVPVWLQPVG RMHPLFLHFP IVILLLAMVM 
EAFRFRTTTA ENRVEASVFY QDFLANLLLI GTLLAGLTVI MGLFLAQEDG YSGQVLFWHK
WSGVGIFFAS ALVYTIRNKV WYNALIARVG ALATIVCLVG AGHYGATLTH GDNFLFAPIS
NELKPTPVSL DQALVFNDVI QPIFEQKCVS CHNPGKLKGE LNLTSMESIL KGGKSGKLFV
AGQPAVSLLL QRIHLPSDEK KHMPPLGKSQ LTPQEMTLLA LWVKGRADFQ KRVVDLPATD
SLRFIASALF KPVQSVETFE FDAADEETVT KLNDDYRTVA PLAKESPALA VNLYNRAAYK
PEKLDELDAV KEQIVYLNLN KMPVTDAALR QIRKFENLQK LDLNFTDITG NGIAELTSLD
HLKTLSLAGT KVTFADLQKQ IGAFKSLKTL AVWNTALTPA QITQLQKEHK NIQFIGGFDG
TASEPIKLNP PQIKNSSTIF NKTLALHLKH PIRDVQLRFT TDGSEPDSIH SPLFTGQTVL
DKPTVIKAKA YKQGWFSSDV ATFSFYKGSY IPDSVNLLLP LNPVHQADGA HTFFDGKLGT
FNANSPAWAN NWAGFRKNEM ALVSEFKKPV SVSSVALRIM VEEETSIFPP GLVEVWGGPS
RTQMKRLGTL KPDLPAKKST HELKAITCTF PPHTISYLKI VAYPLKQIPE WHPNKGNTAL
LLVDEVFIN