Gene Slin_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0959 
Symbol 
ID8724689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1163938 
End bp1166268 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF1549 
Protein accessionYP_003385809 
Protein GI284035879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.185846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA GTGCTTTTTA TATCATTGGA CTGATTGCCG GGGTTGTCGT GTATCTGCAA 
TCCTGTTCAA CGAGTTCGTC CAGCCGGGTT ATTGACCAGG GCCGGTCGGA TAACATACCC
GAAACAATCA GCTATAACTT CGATATCCGG CCCATTCTTT CCGATAAGTG TCTGGCCTGC
CACGGGCCGG ATGCCAACAA GCGGGAGGCT GGTCTGCGAC TCGATATGGC TGAAAGTGCG
TACAAAGCCT TAAAAGAGCA TCCATCGGCT CATGCGCTGG TGCCGGGTAA GCCCGAGCTG
TCGGAAGTGT TTCTGCGCAT TACCTCGCCC GATACGTCGA TCATGATGCC CCCGCCCGCA
TCGAACCTAA AGCTGACCGC CCGCGAAATA AAGCTGATCG AGAAATGGAT TCAGCAAGGG
GCAGCTTATG AAAAACATTG GTCGTTTGTT CCGCCCAAAA AACCGGGTGT GCCAACCGTA
AAACTGGCCG AGTGGCCCAG GAATGAAATT GATTATTTTA TCCTGCAAAA GCAGGAGCAG
CAGGGGGTAA CGCCAAACGA AGAAGCCGAT AAAGAACGAT TGCTCAAGCG GCTGAGTCTG
GATTTGGTCG GCTTGCCGCC TACACTTGCC TTAATGGATG GCTTCCTGGC CGACAAGAGT
GCTAATGCGT ATGAAAAAGT TGTCGATCAG CTACTGAAAA ACCCGGCTTA TGGGGAGAAA
ATGGCGTTGC ACTGGCTCGA TCTGGCCCGG TATGCCGACT CGCACGGGTA TCAGGATGAT
GGGTATCGGA CGCAGTGGCC CTGGCGAGAC TGGGTGATTC ATGCCTTCAA CAAAAACATG
CATTACAACG ATTTCGTGAG CTGGCAACTG GCGGGCGATC TGATGCCCAA CAGTACTAAA
GAACAACTGC TGGCTACGGG CTTCAACCGG AATCATAAAA TCACCGAAGA AGGGGGCGTC
ATTCCCGAAG AGTACCGGAC CATGTACGTG ACCGACCGGA CCGATCTGTT TGGCAAGGGA
TTGCTCGGCG TAACCATCGA ATGCGCCCAT TGTCACGACC ATAAGTACGA CCCCTTCTCG
CATAAAGAGT ATTACCAGCT TTTCGCGTTT TTCAATAATG TGAAAGAGGT TGGGATTGAG
TCCGTTATTG GTGGCCCCGA TACGTACGCC AAGAAACCAT TGATGGAAAT TAGTGATGAG
GAGGTAAAAA GTATCCTGTC GTTCGTCAAT AAACGGGATA CCAACCGCCT GATCGTGTCC
GTGATGGGTG ATCTGGATAC CACCCGAAAA ACATTTATTC TCAAGCGCGG AGTGTACGAT
GCACCCGGTG ATGAAGTGCA GCCCGGAACG CCCAAAGCCA TCTTGCCCTT CAATCCCAGC
TACCCCAAAA ACCGACTTGG GCTGGCCCAA TGGTTGTTCG ACAAGAAAAA CCCGCTTACG
GCCAGGGTGT ATGTTAATCT ACTATGGCAG GAGTTCTTCG GAAAAGGCAT CGTTCGCACA
GCCGGCGATT TCGGGATGCA GGGCGAACTG CCTTCCCATC CCGAACTGCT CGACTGGCTG
GCGGTCGATT TCATGGAGCA TAACTGGGAC ATTAAACGGC TGGTAAAACA GATGGTGACC
TCTGCTACTT ACCGTCAGTC GGCCGTGATT ACGCCTGAGA AACTGGCTGC CGATCCGGAC
AACCGGTTAC TGGCCCGAGG GCCGCGTTAT CGTATCCATG CCGAATTTGT GAAGGATCTG
GTATTGAGCA GTAGCGGGTT GCTGAACCCC ACCATCGGCG GTCCCAGCGT GAAGCCCTAT
CAACCCGCCG GTTTGTGGGA AGGAGCAACG TCGGGGCGGG GTCTGCTGTC GATGTACACG
CAGGATCATG GACCAAGCCT GTACCGGCGT GGTATGTATA CCCTGATCAA ACGTACGGTT
CCGCCCCCGT CGATGGCTAT TTTCGACGCC AGCAACCGCG ATCTCTGCGA AGTAAAACGG
CTGAAAACCA ATACGCCCCT ACAAGCGCTG GTTATGATGA ATGACCCCAC CGTACTGGAA
GCGTCGCGTG TACTGGCCGC CCGGCTGCTG CAGGAGCGGG GAGACGTAAA TGCCAAGATA
GAAAAGGCAT TTCGGCTGAT TGTCAGTCGA AAACCAAATG AGAAGGAAGT CGCTATCCTG
AGTGATTATT ACAATAAAGA ACTAGGGAAA TCGACCCGAG CGAGTGCCGA GAAGTCGCTG
GCAGTGGGCG AGTATCCAAT TCCGGCCAAC ATTGACAAAG TGAAGCTTGC CGCCCTGATG
CGGGTTATGA CAACCATTTA TAATCTCGAA GAAACCATCA CTAAGTCCTG A
 
Protein sequence
MHKSAFYIIG LIAGVVVYLQ SCSTSSSSRV IDQGRSDNIP ETISYNFDIR PILSDKCLAC 
HGPDANKREA GLRLDMAESA YKALKEHPSA HALVPGKPEL SEVFLRITSP DTSIMMPPPA
SNLKLTAREI KLIEKWIQQG AAYEKHWSFV PPKKPGVPTV KLAEWPRNEI DYFILQKQEQ
QGVTPNEEAD KERLLKRLSL DLVGLPPTLA LMDGFLADKS ANAYEKVVDQ LLKNPAYGEK
MALHWLDLAR YADSHGYQDD GYRTQWPWRD WVIHAFNKNM HYNDFVSWQL AGDLMPNSTK
EQLLATGFNR NHKITEEGGV IPEEYRTMYV TDRTDLFGKG LLGVTIECAH CHDHKYDPFS
HKEYYQLFAF FNNVKEVGIE SVIGGPDTYA KKPLMEISDE EVKSILSFVN KRDTNRLIVS
VMGDLDTTRK TFILKRGVYD APGDEVQPGT PKAILPFNPS YPKNRLGLAQ WLFDKKNPLT
ARVYVNLLWQ EFFGKGIVRT AGDFGMQGEL PSHPELLDWL AVDFMEHNWD IKRLVKQMVT
SATYRQSAVI TPEKLAADPD NRLLARGPRY RIHAEFVKDL VLSSSGLLNP TIGGPSVKPY
QPAGLWEGAT SGRGLLSMYT QDHGPSLYRR GMYTLIKRTV PPPSMAIFDA SNRDLCEVKR
LKTNTPLQAL VMMNDPTVLE ASRVLAARLL QERGDVNAKI EKAFRLIVSR KPNEKEVAIL
SDYYNKELGK STRASAEKSL AVGEYPIPAN IDKVKLAALM RVMTTIYNLE ETITKS