Gene Slin_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0957 
Symbol 
ID8724687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1159820 
End bp1162177 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF1549 
Protein accessionYP_003385807 
Protein GI284035877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.244644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAT TAACTGAAAC ATTTTGGCTT TGGCAGTTTT TGGGCCGTCT GCACCCGCTG 
ATGGTTCATT TTCCGGTAAG TTTATTGTGC ATTGCACTCA TACTCGAAGC GGTTGGCTGG
TTCCGCAAAT CGACCGAGTT ACAGGCGGGT ATCCGTGCCA TGGTCTGGAT CGGTACGATC
AGTTCGGTGG TGGCGGCCGG GCTGGGACTG CTTCTGGTCA ATCAGGACGA TTACGGCGGC
AACACCGTAA TCGTGCACCA GTGGTCGGGT CTGGCAACGA TGGCCCTCGC CATATTGACC
GTTCTCGCCC TGCGCTCCGG CCGGACCAGT TTATACCGGG GGTTATTAAC TACCACCGTG
TTGGGCGTGA GCCTGGCGGG TCATTACGGA GCCATGCTCA CCCACGGCGA CGACTACCTG
AGCAGCGTGT TGCCGTTCGA CAAAGGGGGG AGTTCGCCGG TAGAAAGTGA AACCAAATTT
GCCTTCGCTA CTGTCAATCA ACCCCTGAAC GACAAGCAGA TTGGCGAACT GAATATGGAG
GTTCGGTCCA TTCTGGCGCA CAATTGTTAC AGTTGTCATA GTGCCACCAA AACCAAAGGC
GGTCTGCGGC TGGACAAGAA AGAGTTAGTG ATGAAAGGGG GCGAGGATGG CGTTATTCTG
GTGGCTGGCC ATCCGGAAGA TAGCGAAATC ATCCGGCGGA TCAAGCTCCC CGCCGGTCAT
AAAGAGGCTA TGCCAACGAA GGGCAAACGC CTGTCTGAAC ATGACGTTGA GTTACTCGAA
TACTGGATTA AACAAGGCGC TCCCTGGCCA AGTGGCCCCG AAAAAAGCAT TTACCGGGTA
GCGGCTCTGG AACCCCGCTT ACCTGAACTA CCCAATGCCC CGGCCGGTAT TACTAACCCC
ATCGACAAGT TTGTGAACGT CTATTTTCAG CAGCATAAAC TGACCTGGAA GAACAGCGTA
GACGATCGGA CCTACATTCG TCGGGTTTCC CTGGATGTGG TGGGTTTACT GCCAACGCCC
GAACAGATCA AGACATTCGT CGCTGACCAG CGACCCGACA AACGCGACCT GCTTGTTAAG
GAGCTGCTAA ATCGAAATAC CGACTACGCT CAGCACTGGC TAACTTTCTG GAACGACGCC
CTCCGCAATG ATTATACCGG TACGGGCTAC ATTACCGGTG GTCGGTTCGA CATTACCAGT
TGGCTTTATA ACTCGCTGAA AACCAACAAA CCTTATAATC AGTTTGTGCG TGAACTGGTA
AGCCCTACCA AAGAATCGGC GGGGTTTATC AAGGGCATCA AGTGGCGCGG AACGATTAAT
TCGAGCCAGC GCACCGAAAT GCAGGCCGCG CAAAACGTAT CGCAGGTGCT GCTTGGGCTC
AATCTCAAGT GTGCGTCGTG TCACGATAGC TTTATAAGCG ACTGGAAACT GGCCGATGCC
TATGCCTTTG CCAACGTATT TGCCGATACA ACCCTGGAGA TCAATCGCTG CGATAAGCCG
ACAGGCAAAA AAGCCGGTAC ACGCATCATC TTCGAAAAAC TGGGTACTAT CAATGGCAAA
GCAACTACCG ACGAACGACT CAAAGAACTG GCCGATTTTC TGGTGCAGCC CAAAGACGGC
CGATTGTACC GCACGGTGGT GAACCGGATT TGGGCGCAGG TGATGGGCCG GGGAATCATT
GAGCCGGTCG ATGTGATGGA TAACGACCCT TGGAGTCAGG ATCTGCTGGA CTGGCTGGCG
TCTGATTTCG TTACGAATGG CTACGACATC AAAAAGCTGA TGTACACCAT TCTAACCTCG
AAAACCTATC AGCTTCCTTC TGTTGGGCTC AAAGAAGCGG ACATGATCAC GGCCCCCAAC
TTTGTTTTTC AGGGTATGGT ACGCCGTCGC TTAACCGCCG AGCAGTTTGC CGATGCCGTC
AGTCTGGCGT TCAGCCCGGT TTATGCCGAC ACATCGATTG TGGAGAAGCA GTTTCCGCAG
CAACTCAAAA AAGAAATGCC GTTTCCACGG GCGTCTCTGG TTAAAAACGA CCCGTTCCTG
ACTGCTCTGG GCCGCCCGAA CCGCGAAACG GTCAGCACCA GCCGGTCGTC GCAGGCGAAC
CTGTTGCAGG CTCTGGAGCT AACCAACGGG GAGAAGTTCA ACGATGCCCT TAAGCGCGGG
GCTCAGCAAT GGAAAGCTAC CTACCCAACG TCGGATGTGC TGGTACGAAA TCTCTACTGG
AAAGCGCTGG GCCGGGAGCC AAAACCCAAT GAAATGGCCG TTGCACAGAA AATTGTGGGC
AAAAACCCCA GCACAGAGGG AATTCAGGAT CTGGTATGGG CTATCAGCCT GCACCCCGAG
TTTCAGTTAA TTTATTGA
 
Protein sequence
MTVLTETFWL WQFLGRLHPL MVHFPVSLLC IALILEAVGW FRKSTELQAG IRAMVWIGTI 
SSVVAAGLGL LLVNQDDYGG NTVIVHQWSG LATMALAILT VLALRSGRTS LYRGLLTTTV
LGVSLAGHYG AMLTHGDDYL SSVLPFDKGG SSPVESETKF AFATVNQPLN DKQIGELNME
VRSILAHNCY SCHSATKTKG GLRLDKKELV MKGGEDGVIL VAGHPEDSEI IRRIKLPAGH
KEAMPTKGKR LSEHDVELLE YWIKQGAPWP SGPEKSIYRV AALEPRLPEL PNAPAGITNP
IDKFVNVYFQ QHKLTWKNSV DDRTYIRRVS LDVVGLLPTP EQIKTFVADQ RPDKRDLLVK
ELLNRNTDYA QHWLTFWNDA LRNDYTGTGY ITGGRFDITS WLYNSLKTNK PYNQFVRELV
SPTKESAGFI KGIKWRGTIN SSQRTEMQAA QNVSQVLLGL NLKCASCHDS FISDWKLADA
YAFANVFADT TLEINRCDKP TGKKAGTRII FEKLGTINGK ATTDERLKEL ADFLVQPKDG
RLYRTVVNRI WAQVMGRGII EPVDVMDNDP WSQDLLDWLA SDFVTNGYDI KKLMYTILTS
KTYQLPSVGL KEADMITAPN FVFQGMVRRR LTAEQFADAV SLAFSPVYAD TSIVEKQFPQ
QLKKEMPFPR ASLVKNDPFL TALGRPNRET VSTSRSSQAN LLQALELTNG EKFNDALKRG
AQQWKATYPT SDVLVRNLYW KALGREPKPN EMAVAQKIVG KNPSTEGIQD LVWAISLHPE
FQLIY