Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0943 |
Symbol | |
ID | 8724673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1134918 |
End bp | 1137326 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003385793 |
Protein GI | 284035863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.747295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGA ACTACCTTAA AATTGCGATC AGGAATCTGC TTCGGCACAA GTTCTATGCC CTGCTCAACA TCATTGGTCT AGCCGTTGGT ATGACGTTTA CCGGGCTCAT TGGCAGTTAC GTCTGGAGCG AATTACAGGT TAATAACGGA CTACGCAATG CCCCTTATCA ATACATCATC CGCAGTAAAT GGAAACAGCC CGGCTTAGGC TACGAAGATG TAACGGTGGC CCCGCTGGGT AAAACGCTGA AAGAAAAATA CCCTGGCTTA GTCGCTAATT ATTACCGGTT CGACGTACTC ACGACCGCCA TATCCAGCGG CAATAAACAC TTTGTTCGGG AGGTAGCCCA AGCGGGTGAC TCAACCATGA TATCCATGTT TGGGTTTACC ATGCTGTATG GGAATGCCCG AACAGCCCTC AAGGCGCCAA ATTCAGTGGT GATTACGGAA GAAAACGCCA TCAAGTATTT TGGTAAAACG GATGTACTTG GGCAAGTGCT GAATCTGAGC AATTATACAG GCAGTAAGCA GGAATTTGTA GTGACCGGAG TATTGAAAAG TCTGCCTAAA AACTCGGTTA CCTACCTGTG GGATTTGCCG GTAAATGTCT TCATCCCCTT CAATAGTTTG CAGGGTCGCA CGGATGCAGA TGGCTGGATG ACCTGGAATA TAGCCAACTA CATCGAGTTA AAAGAAGGCA TAAGTCAGGA AGATATACAG CAGCCAATGG AGCAAATTCT GACCACCTAC GCCCCAAAAA CCGCTCGTAA AAATCTTCAG CCCTACCTTA CGCCACTAAA AGATTACTAT CGCGATTTTA ACAAGGGCAT TGTCCGGAAA ACGATCTATA CGCTGTCGGG AATAGCTCTG TTTATCCTAT TAATGGCTAT CGTCAATTTC GTCAATAGCG CAGTGGCTAA CTCAAGCTCA CGCATCAAAG AGATTGGCAT ACGAAAATCA TTGGGGGGTC AAAAGCAGCA ATTGATCGTC CAGTTTTTGG CCGAGTCGAC CATAATAGCG ATGCTGTCGA TGATCATATC ACTGCTTTTT TACGAGTTAT TCCGATCTTC ATTCAGCGAT ATAGTCGGCA GAAGAATCGA CTCGCTATGG ACTGTATCGC CTTATTTTCT ACCTGTACTT GGCTTGTCGA CTCTCCTGAT TGGACTATTA GCCGGACTCT ATCCGGCACT TATCCTATCC TCTTTACCGT CGGTCGATTC CTTGAAAGGT AAATGGAAAT CAGTAAAAGA GGGGATCGTC TTCAGGCGGT TACTAATAAC GGCTCAGTTT TCCATTGCGC TGCTTGTGTG TTGCGGAGCC GTAATTGTCT CCCAACAGGT CACCTATTTA TTTGACAAAG ACTTAGGCTA CAATAAAGAG TCGATTGTAC TACTATCCAT ACCCCGTGAC TGGACACCGC AGGGCGTAGC TAGCATAGAA GCCGTTCGGA ACGAATTGGC CCGATTGCCC GTCGTAAAAG ACATAAGTAT TTCCTCTTCG AGCCTCAAAG GTGGTCCGGC CTACGACCTG CACATGTATG CGGTTGAAGA AGATTCTACC GAAGCCATGT CGACATCCAT CCTCCAAACC GACGAAAATT TTGTTCGAAC ATACCAGATA CCACTACTTG CCGGTCGGTT TTATACGTCT TCGGCGCGGG CAGAGCAGGA AAACAAACTC GTTCTAAATG AATCAGCCGT GAAGGCATTG GGCTACCACA ACCCGGAAGT GGCTGTTGGA CGACAGGTCT ATATTCAGGG TTATCGAAGT CCCATAACCA TTATTGGCGT AACGAAGGAT TTTAGTTTTC GCTCAATGAA GGAAAAGATT ATGCCCACTG CCATCGGCCA TATCAATGGA GCCGGTTATC TGTTTGCTTA CTTTTCGGTT AAACTTAGCT CCGGCGATTT ACCCAGCTCT TTGGTCAGTA TCGAGAAGCG ATTCCACGAG CTGCTCCCTG ACGCGCCTTT CGAGTATTCG TTTACGGACG AAGCATTGCA GCAATTGTAT CAAGCCGAAA TTCAACTAAA AAAAGCTTCA CAGACGGCTA CCCTTCTAGC TATGCTCATC GTTGTGTTGG GTATTCTGGC GATGGTTTCC CTGAGCTTGG CTCGGCGAAT GAAGGAAATG AGTATTCGTA AAGTACTGGG CGCGAGTGTG CCAGGGATTG TCCTGTTGTT TATGAAGGAG TTCCTACGGG CATGGCTTAT CGCAATGCTG GTTGCATGCC CCATAGCCTA TCTGCTTATG GAGCATTGGT TGCAGACTTT CGCCTATCAC ATCGACGTCA GCCTGTTCTC ATTTGGTTTC ATTAGTCTGT TCTTTCTATT ACTCATCGGC CTGATCGTCA GTTCCCAAAG CATCAAAGCG GCTCTGATGA ACCCGGTGAA GAGTTTGCGT AGTGAATAG
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Protein sequence | MFQNYLKIAI RNLLRHKFYA LLNIIGLAVG MTFTGLIGSY VWSELQVNNG LRNAPYQYII RSKWKQPGLG YEDVTVAPLG KTLKEKYPGL VANYYRFDVL TTAISSGNKH FVREVAQAGD STMISMFGFT MLYGNARTAL KAPNSVVITE ENAIKYFGKT DVLGQVLNLS NYTGSKQEFV VTGVLKSLPK NSVTYLWDLP VNVFIPFNSL QGRTDADGWM TWNIANYIEL KEGISQEDIQ QPMEQILTTY APKTARKNLQ PYLTPLKDYY RDFNKGIVRK TIYTLSGIAL FILLMAIVNF VNSAVANSSS RIKEIGIRKS LGGQKQQLIV QFLAESTIIA MLSMIISLLF YELFRSSFSD IVGRRIDSLW TVSPYFLPVL GLSTLLIGLL AGLYPALILS SLPSVDSLKG KWKSVKEGIV FRRLLITAQF SIALLVCCGA VIVSQQVTYL FDKDLGYNKE SIVLLSIPRD WTPQGVASIE AVRNELARLP VVKDISISSS SLKGGPAYDL HMYAVEEDST EAMSTSILQT DENFVRTYQI PLLAGRFYTS SARAEQENKL VLNESAVKAL GYHNPEVAVG RQVYIQGYRS PITIIGVTKD FSFRSMKEKI MPTAIGHING AGYLFAYFSV KLSSGDLPSS LVSIEKRFHE LLPDAPFEYS FTDEALQQLY QAEIQLKKAS QTATLLAMLI VVLGILAMVS LSLARRMKEM SIRKVLGASV PGIVLLFMKE FLRAWLIAML VACPIAYLLM EHWLQTFAYH IDVSLFSFGF ISLFFLLLIG LIVSSQSIKA ALMNPVKSLR SE
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