Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0931 |
Symbol | |
ID | 8724661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1115208 |
End bp | 1117622 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003385782 |
Protein GI | 284035852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGTA ATTACGTAAA AATTGCCACC CGAAACCTTG TCAGGAACAG GGTATATTCT GCCATCAATA TGGGTGGTCT GGCACTGGGC ATGGCCTGCT GCCTGCTCAT TGCCCTCTAC GTCTATGACG AACTGAGCTA CGACCGCTTC AATGCAAATT TCGCGCACAT TTATCGGGTT ACCGAACGGC AAACACAGCC CGAAGGTATT TTCGATGTAG CCGTTACGCC GGGACCGCTG GCCCCTGCGC TTGAGAAAGA CTTCCCCGAA GTACAGCGCA CCACCCGCAT TGGTCAGTGG CACGGCCTAT TGACCAAAGG GCGCCAGGCC CTTGAAGCCG AGCAGTTTTT GATCGTTGAC CCCAGCTTTT TCAGTTTGTT CAGTTATCCG CTCATCATGG GCGATACGAA CACCATCTTC CGTGGCCCTA ACGAACTGAT TTTCAGCGAA GCCACCGCCG AACGTTTTTT TGGAGCCGAC TGGCGGCAGA AAAACCTGGT GGGTCAGTCG ATCACGCTTA ACAAAGACCA GACTTTCACG CTGGTTGGCG TGGCGAAGAA CCCACCCACG CAATCGCACA TTCAGTTTGA TGTCCTGATG CCATTCAAAT GGCTTGAACG CAACGACGAA TGGAGCATGA AATGGAGCAG CAACAGCTAC CATACCTACC TTCAGTTACG GCCGGATGTA GCCGGGAAAG CCATCGACCC AACTGCTTTT GCCAATAAAC TCCGGGGGCA GCTCAAGGAG TATCATTCGG GCAACGAAAC ACCCCTACTG CTGCAACCTC TATCCGACAT TTACCTGTAC TCCAAATTCG CCTTTGGCAC CGATTACGGC AAACGCAGCG ACATTACCTA CATCCGGATT TTCGTAGCGG TTGGCCTGAT CGTGCTGCTC ATTGCGGTGA TCAACTTTAT CAATCTGGCC ACGGCGCGGG CGTCGCAGCG GGCCAAAGAA GTGGGCGTTC GGAAGAGCGT AGGCGCGCAG CGGTCGAGTC TGGTGACGCA GTTTCTGAGC GAGGCCTTAT TAATGACAAC CTTAGCCATG TCGGTTTCTC TGTTGCTGGC CGAACTGCTC CTGCCACTAT TCAACAATCT GGCCGAAAAA AGCATGTCGA TTCCCTACCA GATGCCCGCT TTTTGGCTGG TCATTATTGG CCTGACCGGC GTAGTTAGCT TACTGACCGG CCTTTATCCG GCCTTTTTCC TCTCGTCGTT CCGGCCTGTC GCGGTGCTAA AAACGGGCAT TTCGGGCTAC TTTTCCAGTG GTCAAACGGG ACGAAGCTTC CGGCAGTCGC TAGTGGTGGG CCAGTTCGTA CTCTCTATTG CACTCGCGAT TAGCACGGTG GTAATATATC GGCAACTGTC TTACCTACAG AGCACTAAAC TGGGATTCGA CAAATCGCAA CTACTGCACG TGCGACTCAA AGGTGATCTG AAACAAAACG CGCTGCGATT CAAGACCGAC GTGTCGCAAT TGCCGGGGGT AGCGCAGGCA TCCATGACCA CGAGTAATCT GGTCGACATG CAAAACAGTT CAACGATTGA ATGGGAAGGC CAGACACCAA AAGACGAATT TCTGATAACA CAGATGAACG TGGACGCTGA TTTTATCAAG ACGACCGGTA TGTCGATGGC TGCGGGACGG AATTTCTCCG CGCAGATAAC CAGTGATACG TTGTCTAAAT TGGGCACCTA TCTGATCAAC GAAACGGCCG CCAAACGCAT GGGCTGGACA CCCACCAGTG CTCTGGGAAA GAAGGTAAAA TTCTGGGGAA CGGATGGCAC TATCATCGGC GTGGTGAAAG ACTTCCATTT TCGGCCATTG CACGTTAGCA TCGAACCCTT CATTCTTCGT TTTCGGCCGA AAGAGTTCTA TTTTGAGTTA CTGGTAAAAA CAAAGCCCGG TATGGTCGCC AGCACCCTGC CTGCTATAAC GGCCGTTTAC AAGAAACTAG ACCCAAACTA CCCAATCTCG TACGGTTTCG TCGATCAGGA TCTGGACAGA CAATACCGTT CCGAACAGCG TATTGGTCAG ATCATTCTCT ACTTTTCTAT CCTGACGATT CTGGTTTCCT GCCTTGGTTT GTTTGGTCTG ACCGCGTTCA CCGCCGAACA GCGTACGAAG GAAATCGGCA TCCGAAAAGT ACTGGGAGCT TCGGTCGCCA GCATCGTAGC CCTTCTGTCT AAAGATTTCC TGAAACTGGT ACTGATCGCC CTCGTCATTG CCTCACCCAT CGCCTGGTAT GCCATGAACC GGTGGCTGCA AAGCTTTGCC TACAAAACCA GTTTCGAGTG GTGGATGCCT GCTCTGGCCG GGTTGGTAGC GATTTGCATT GCCCTGCTCA CCATCAGTTT TCAGAGTATC AAAGCCGCCA TTGCGAACCC AGTGAAGAGT CTGCGAAATG AGTAA
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Protein sequence | MLRNYVKIAT RNLVRNRVYS AINMGGLALG MACCLLIALY VYDELSYDRF NANFAHIYRV TERQTQPEGI FDVAVTPGPL APALEKDFPE VQRTTRIGQW HGLLTKGRQA LEAEQFLIVD PSFFSLFSYP LIMGDTNTIF RGPNELIFSE ATAERFFGAD WRQKNLVGQS ITLNKDQTFT LVGVAKNPPT QSHIQFDVLM PFKWLERNDE WSMKWSSNSY HTYLQLRPDV AGKAIDPTAF ANKLRGQLKE YHSGNETPLL LQPLSDIYLY SKFAFGTDYG KRSDITYIRI FVAVGLIVLL IAVINFINLA TARASQRAKE VGVRKSVGAQ RSSLVTQFLS EALLMTTLAM SVSLLLAELL LPLFNNLAEK SMSIPYQMPA FWLVIIGLTG VVSLLTGLYP AFFLSSFRPV AVLKTGISGY FSSGQTGRSF RQSLVVGQFV LSIALAISTV VIYRQLSYLQ STKLGFDKSQ LLHVRLKGDL KQNALRFKTD VSQLPGVAQA SMTTSNLVDM QNSSTIEWEG QTPKDEFLIT QMNVDADFIK TTGMSMAAGR NFSAQITSDT LSKLGTYLIN ETAAKRMGWT PTSALGKKVK FWGTDGTIIG VVKDFHFRPL HVSIEPFILR FRPKEFYFEL LVKTKPGMVA STLPAITAVY KKLDPNYPIS YGFVDQDLDR QYRSEQRIGQ IILYFSILTI LVSCLGLFGL TAFTAEQRTK EIGIRKVLGA SVASIVALLS KDFLKLVLIA LVIASPIAWY AMNRWLQSFA YKTSFEWWMP ALAGLVAICI ALLTISFQSI KAAIANPVKS LRNE
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