Gene Slin_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0931 
Symbol 
ID8724661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1115208 
End bp1117622 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003385782 
Protein GI284035852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTA ATTACGTAAA AATTGCCACC CGAAACCTTG TCAGGAACAG GGTATATTCT 
GCCATCAATA TGGGTGGTCT GGCACTGGGC ATGGCCTGCT GCCTGCTCAT TGCCCTCTAC
GTCTATGACG AACTGAGCTA CGACCGCTTC AATGCAAATT TCGCGCACAT TTATCGGGTT
ACCGAACGGC AAACACAGCC CGAAGGTATT TTCGATGTAG CCGTTACGCC GGGACCGCTG
GCCCCTGCGC TTGAGAAAGA CTTCCCCGAA GTACAGCGCA CCACCCGCAT TGGTCAGTGG
CACGGCCTAT TGACCAAAGG GCGCCAGGCC CTTGAAGCCG AGCAGTTTTT GATCGTTGAC
CCCAGCTTTT TCAGTTTGTT CAGTTATCCG CTCATCATGG GCGATACGAA CACCATCTTC
CGTGGCCCTA ACGAACTGAT TTTCAGCGAA GCCACCGCCG AACGTTTTTT TGGAGCCGAC
TGGCGGCAGA AAAACCTGGT GGGTCAGTCG ATCACGCTTA ACAAAGACCA GACTTTCACG
CTGGTTGGCG TGGCGAAGAA CCCACCCACG CAATCGCACA TTCAGTTTGA TGTCCTGATG
CCATTCAAAT GGCTTGAACG CAACGACGAA TGGAGCATGA AATGGAGCAG CAACAGCTAC
CATACCTACC TTCAGTTACG GCCGGATGTA GCCGGGAAAG CCATCGACCC AACTGCTTTT
GCCAATAAAC TCCGGGGGCA GCTCAAGGAG TATCATTCGG GCAACGAAAC ACCCCTACTG
CTGCAACCTC TATCCGACAT TTACCTGTAC TCCAAATTCG CCTTTGGCAC CGATTACGGC
AAACGCAGCG ACATTACCTA CATCCGGATT TTCGTAGCGG TTGGCCTGAT CGTGCTGCTC
ATTGCGGTGA TCAACTTTAT CAATCTGGCC ACGGCGCGGG CGTCGCAGCG GGCCAAAGAA
GTGGGCGTTC GGAAGAGCGT AGGCGCGCAG CGGTCGAGTC TGGTGACGCA GTTTCTGAGC
GAGGCCTTAT TAATGACAAC CTTAGCCATG TCGGTTTCTC TGTTGCTGGC CGAACTGCTC
CTGCCACTAT TCAACAATCT GGCCGAAAAA AGCATGTCGA TTCCCTACCA GATGCCCGCT
TTTTGGCTGG TCATTATTGG CCTGACCGGC GTAGTTAGCT TACTGACCGG CCTTTATCCG
GCCTTTTTCC TCTCGTCGTT CCGGCCTGTC GCGGTGCTAA AAACGGGCAT TTCGGGCTAC
TTTTCCAGTG GTCAAACGGG ACGAAGCTTC CGGCAGTCGC TAGTGGTGGG CCAGTTCGTA
CTCTCTATTG CACTCGCGAT TAGCACGGTG GTAATATATC GGCAACTGTC TTACCTACAG
AGCACTAAAC TGGGATTCGA CAAATCGCAA CTACTGCACG TGCGACTCAA AGGTGATCTG
AAACAAAACG CGCTGCGATT CAAGACCGAC GTGTCGCAAT TGCCGGGGGT AGCGCAGGCA
TCCATGACCA CGAGTAATCT GGTCGACATG CAAAACAGTT CAACGATTGA ATGGGAAGGC
CAGACACCAA AAGACGAATT TCTGATAACA CAGATGAACG TGGACGCTGA TTTTATCAAG
ACGACCGGTA TGTCGATGGC TGCGGGACGG AATTTCTCCG CGCAGATAAC CAGTGATACG
TTGTCTAAAT TGGGCACCTA TCTGATCAAC GAAACGGCCG CCAAACGCAT GGGCTGGACA
CCCACCAGTG CTCTGGGAAA GAAGGTAAAA TTCTGGGGAA CGGATGGCAC TATCATCGGC
GTGGTGAAAG ACTTCCATTT TCGGCCATTG CACGTTAGCA TCGAACCCTT CATTCTTCGT
TTTCGGCCGA AAGAGTTCTA TTTTGAGTTA CTGGTAAAAA CAAAGCCCGG TATGGTCGCC
AGCACCCTGC CTGCTATAAC GGCCGTTTAC AAGAAACTAG ACCCAAACTA CCCAATCTCG
TACGGTTTCG TCGATCAGGA TCTGGACAGA CAATACCGTT CCGAACAGCG TATTGGTCAG
ATCATTCTCT ACTTTTCTAT CCTGACGATT CTGGTTTCCT GCCTTGGTTT GTTTGGTCTG
ACCGCGTTCA CCGCCGAACA GCGTACGAAG GAAATCGGCA TCCGAAAAGT ACTGGGAGCT
TCGGTCGCCA GCATCGTAGC CCTTCTGTCT AAAGATTTCC TGAAACTGGT ACTGATCGCC
CTCGTCATTG CCTCACCCAT CGCCTGGTAT GCCATGAACC GGTGGCTGCA AAGCTTTGCC
TACAAAACCA GTTTCGAGTG GTGGATGCCT GCTCTGGCCG GGTTGGTAGC GATTTGCATT
GCCCTGCTCA CCATCAGTTT TCAGAGTATC AAAGCCGCCA TTGCGAACCC AGTGAAGAGT
CTGCGAAATG AGTAA
 
Protein sequence
MLRNYVKIAT RNLVRNRVYS AINMGGLALG MACCLLIALY VYDELSYDRF NANFAHIYRV 
TERQTQPEGI FDVAVTPGPL APALEKDFPE VQRTTRIGQW HGLLTKGRQA LEAEQFLIVD
PSFFSLFSYP LIMGDTNTIF RGPNELIFSE ATAERFFGAD WRQKNLVGQS ITLNKDQTFT
LVGVAKNPPT QSHIQFDVLM PFKWLERNDE WSMKWSSNSY HTYLQLRPDV AGKAIDPTAF
ANKLRGQLKE YHSGNETPLL LQPLSDIYLY SKFAFGTDYG KRSDITYIRI FVAVGLIVLL
IAVINFINLA TARASQRAKE VGVRKSVGAQ RSSLVTQFLS EALLMTTLAM SVSLLLAELL
LPLFNNLAEK SMSIPYQMPA FWLVIIGLTG VVSLLTGLYP AFFLSSFRPV AVLKTGISGY
FSSGQTGRSF RQSLVVGQFV LSIALAISTV VIYRQLSYLQ STKLGFDKSQ LLHVRLKGDL
KQNALRFKTD VSQLPGVAQA SMTTSNLVDM QNSSTIEWEG QTPKDEFLIT QMNVDADFIK
TTGMSMAAGR NFSAQITSDT LSKLGTYLIN ETAAKRMGWT PTSALGKKVK FWGTDGTIIG
VVKDFHFRPL HVSIEPFILR FRPKEFYFEL LVKTKPGMVA STLPAITAVY KKLDPNYPIS
YGFVDQDLDR QYRSEQRIGQ IILYFSILTI LVSCLGLFGL TAFTAEQRTK EIGIRKVLGA
SVASIVALLS KDFLKLVLIA LVIASPIAWY AMNRWLQSFA YKTSFEWWMP ALAGLVAICI
ALLTISFQSI KAAIANPVKS LRNE