Gene Slin_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0929 
Symbol 
ID8724659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1112078 
End bp1114453 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content48% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003385780 
Protein GI284035850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.790047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGCA ATTATTTGAA AATCGCCTGG CGCAACCTCG TCAGCCAGAA AGGGTACTCA 
TTCATCAATA TTACAGGCTT GGCTGTTGGC ATGGCCGTCG CCATGCTTAT TGGGCTGTGG
GTCTATCATG AGTATTCGTA TGACAAGTTT CTCCCAAATT ATCAGCAGCT ATACCAGGTA
AGGCGAAACT ATAACAGCAA TGGCGACACG CTCACGTTTT CGTCTACCTC GCTCAAGTTA
GCTGACGCCT TGCGTAATGA GATACCAGAG ATTGACTATG TTGCCGAAAG CGATTACATA
GGCTCTTCTC ATGGACTCAA GGTTGGTGAC AAAAAATTCT ATGTGAACGG TGGCCAAATC
GGAAGCGACT TTCTGAAAAT GTTTCAGTAT CCGCTGCTTG AAGGAGAGGC TAGTATGGCG
TTGAAAGATC CTTATTCCAT TGTTCTTACC GAGTCGACGG CCAAAGCGCT ATTTGGCAAC
GAAGTCCCAA TGGGTAAAGT CGTCCGCTTT GATAATCAGA ATGACTTGAA AGTGACCGGT
ATCTTGAAAG ACCTTCCAAA AAATTCTTCG TTGCAATTCG AGTTTCTGGT TCCCTTTAGC
TATTTCGAAG CTACAGCAAG CAACGTCCGA CTGGCCCGCA GCGGCAGCTT TAGTGATAAC
TCCTTTCAAA TTTTTGTCAA GCTCAAACCC GGTGTATCAT ACGCTCAGGT AGCTCCTAAA
ATTGCCCTTA TTGAACACAC CGAGACTAAT AGTGTCAATG CCATGAATTC GGTGGTTATC
CTGCAGCCGT TGCAGAACTG GCATCTGTAC TCAACTTACC AGAATGGAAA AGAAGCGGGT
GGGTTCATTG ACTACGTCCG TATGTTTACC CTCATTGGTA TCCTGGTTGT CCTCATTGCC
TGCATCAACT TCGTTAACCT GACCACGGCG CGATCTGCCA AGCGAGCCAA AGAAGTGGGC
ATTCGAAAGG CAGTTGGGTC GCAACGACAA CAGCTTATCG GCCAATTTCT AACCGAATCG
TTTCTGCTCA CGTTTGTGGC CTTTTTATTC TCACTACTCG TTGTACAGCT CTCCCTACCT
GCGTTCAATG CGTTAATTAA TGGAGAGGTA TCAATTCCTT ACGCCAGGGG TGAGTTTTGG
CTGGCTCTGC TAAGTTGCCT GCTGATTACG GCTCTCCTGG CAGGCAGTGT ACCGGCATTT
TATCTTTCTT CCTTTCAACC AGTGAAGGTA TTGAAAGGCA TCATGCAAGT TGGCAAAGCG
GCTTCATGGC CTCGTAAAGC TTTAGTGGTA GCCCAGTTTA GCTGTTCCAT CGCATTGATT
CTGAGCGCCG TCATCGTTTT TCAGCAAATA CAATATGCTA AAAATAGACC GACAGGCTAC
GATGTCAACC GCTTGATGAT GACTAATATG AATAGCGAGC TGGGCGCTAA TTTCACCATC
CTGAAAGATG AATTGCTCAG GAACGGCATT GCCGAAAGTG TATCGCAGTC ATCGAGCCCG
GCTACCGATA TCTGGTGGCA TTCCGATGTG GAGAAATGGC CGGGCAAAAA CGCTGGTGAA
ACGATAGAAA TGGGCACCAT CGTGGTAGCT AAAGACTACT TTAAAACGGT AGGCATGACA
CTGGCACAGG GGCGGGTTTT CACGAGTAAA AACGATACAA CCAGCGTTAT TTTCAACGAA
GCAGCCATGA AGCAAATGCG CTTGGCGCAT CCTATCGGTC AGCTTATTGA ATGGCAGGGT
AAACAACTGC GAATCGTTGG TGTAATGAAA GACGCCCTTG TTCAATCGCC CTTCACCCGG
GCAAACCCTG GCATGTTCCT TTGCAGGCCG GAGTCGCTCA ACGTTCTTTT GTACCGTATT
TCGCCCCGCC TGTCAACCCA GGAAGCCCTC GCCCAGATGA CGGCATTGTT TAACAAATAC
AATCCTTCTT ATCCATACAG TTATCAGTTC GCCGATGTTA CCTACGCAGC CAAGTTTAAC
CTCGAAACAC TAGTCGGCAA ACTGGCGGGC ATTTTTGCCT GTCTAGCCAT TTTCATTTCA
TGCCTGGGGC TATTTGGCCT GGCTTCGTTC ATGGCCGAAC GGCGTACGAA GGAGATTGGC
GTGCGTAAAG TGCTGGGTGC ATCCGTGCTG AATGTATGGG GATTGCTCTC GAAGGAATTT
GTCTATCTGG TTGGCATCGC CTTTATCATA GCGTCGACGC TAGCATATTA CCTGCTTTCC
AACTGGCTAC AGCGGTACGA ATACCGAACA GAAATGTCGT GGTGGATTTT CGCCCTAACG
GGTTTGGGAT CTTTGACCGT TACGTTGCTC ACAGTGAGCT ACCAGAGCAT CAAAGCCGCC
TTGCTGAATC CGGTAAAGAG TTTGAAAAGC GAATAA
 
Protein sequence
MLRNYLKIAW RNLVSQKGYS FINITGLAVG MAVAMLIGLW VYHEYSYDKF LPNYQQLYQV 
RRNYNSNGDT LTFSSTSLKL ADALRNEIPE IDYVAESDYI GSSHGLKVGD KKFYVNGGQI
GSDFLKMFQY PLLEGEASMA LKDPYSIVLT ESTAKALFGN EVPMGKVVRF DNQNDLKVTG
ILKDLPKNSS LQFEFLVPFS YFEATASNVR LARSGSFSDN SFQIFVKLKP GVSYAQVAPK
IALIEHTETN SVNAMNSVVI LQPLQNWHLY STYQNGKEAG GFIDYVRMFT LIGILVVLIA
CINFVNLTTA RSAKRAKEVG IRKAVGSQRQ QLIGQFLTES FLLTFVAFLF SLLVVQLSLP
AFNALINGEV SIPYARGEFW LALLSCLLIT ALLAGSVPAF YLSSFQPVKV LKGIMQVGKA
ASWPRKALVV AQFSCSIALI LSAVIVFQQI QYAKNRPTGY DVNRLMMTNM NSELGANFTI
LKDELLRNGI AESVSQSSSP ATDIWWHSDV EKWPGKNAGE TIEMGTIVVA KDYFKTVGMT
LAQGRVFTSK NDTTSVIFNE AAMKQMRLAH PIGQLIEWQG KQLRIVGVMK DALVQSPFTR
ANPGMFLCRP ESLNVLLYRI SPRLSTQEAL AQMTALFNKY NPSYPYSYQF ADVTYAAKFN
LETLVGKLAG IFACLAIFIS CLGLFGLASF MAERRTKEIG VRKVLGASVL NVWGLLSKEF
VYLVGIAFII ASTLAYYLLS NWLQRYEYRT EMSWWIFALT GLGSLTVTLL TVSYQSIKAA
LLNPVKSLKS E