Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0929 |
Symbol | |
ID | 8724659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1112078 |
End bp | 1114453 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003385780 |
Protein GI | 284035850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.790047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGCA ATTATTTGAA AATCGCCTGG CGCAACCTCG TCAGCCAGAA AGGGTACTCA TTCATCAATA TTACAGGCTT GGCTGTTGGC ATGGCCGTCG CCATGCTTAT TGGGCTGTGG GTCTATCATG AGTATTCGTA TGACAAGTTT CTCCCAAATT ATCAGCAGCT ATACCAGGTA AGGCGAAACT ATAACAGCAA TGGCGACACG CTCACGTTTT CGTCTACCTC GCTCAAGTTA GCTGACGCCT TGCGTAATGA GATACCAGAG ATTGACTATG TTGCCGAAAG CGATTACATA GGCTCTTCTC ATGGACTCAA GGTTGGTGAC AAAAAATTCT ATGTGAACGG TGGCCAAATC GGAAGCGACT TTCTGAAAAT GTTTCAGTAT CCGCTGCTTG AAGGAGAGGC TAGTATGGCG TTGAAAGATC CTTATTCCAT TGTTCTTACC GAGTCGACGG CCAAAGCGCT ATTTGGCAAC GAAGTCCCAA TGGGTAAAGT CGTCCGCTTT GATAATCAGA ATGACTTGAA AGTGACCGGT ATCTTGAAAG ACCTTCCAAA AAATTCTTCG TTGCAATTCG AGTTTCTGGT TCCCTTTAGC TATTTCGAAG CTACAGCAAG CAACGTCCGA CTGGCCCGCA GCGGCAGCTT TAGTGATAAC TCCTTTCAAA TTTTTGTCAA GCTCAAACCC GGTGTATCAT ACGCTCAGGT AGCTCCTAAA ATTGCCCTTA TTGAACACAC CGAGACTAAT AGTGTCAATG CCATGAATTC GGTGGTTATC CTGCAGCCGT TGCAGAACTG GCATCTGTAC TCAACTTACC AGAATGGAAA AGAAGCGGGT GGGTTCATTG ACTACGTCCG TATGTTTACC CTCATTGGTA TCCTGGTTGT CCTCATTGCC TGCATCAACT TCGTTAACCT GACCACGGCG CGATCTGCCA AGCGAGCCAA AGAAGTGGGC ATTCGAAAGG CAGTTGGGTC GCAACGACAA CAGCTTATCG GCCAATTTCT AACCGAATCG TTTCTGCTCA CGTTTGTGGC CTTTTTATTC TCACTACTCG TTGTACAGCT CTCCCTACCT GCGTTCAATG CGTTAATTAA TGGAGAGGTA TCAATTCCTT ACGCCAGGGG TGAGTTTTGG CTGGCTCTGC TAAGTTGCCT GCTGATTACG GCTCTCCTGG CAGGCAGTGT ACCGGCATTT TATCTTTCTT CCTTTCAACC AGTGAAGGTA TTGAAAGGCA TCATGCAAGT TGGCAAAGCG GCTTCATGGC CTCGTAAAGC TTTAGTGGTA GCCCAGTTTA GCTGTTCCAT CGCATTGATT CTGAGCGCCG TCATCGTTTT TCAGCAAATA CAATATGCTA AAAATAGACC GACAGGCTAC GATGTCAACC GCTTGATGAT GACTAATATG AATAGCGAGC TGGGCGCTAA TTTCACCATC CTGAAAGATG AATTGCTCAG GAACGGCATT GCCGAAAGTG TATCGCAGTC ATCGAGCCCG GCTACCGATA TCTGGTGGCA TTCCGATGTG GAGAAATGGC CGGGCAAAAA CGCTGGTGAA ACGATAGAAA TGGGCACCAT CGTGGTAGCT AAAGACTACT TTAAAACGGT AGGCATGACA CTGGCACAGG GGCGGGTTTT CACGAGTAAA AACGATACAA CCAGCGTTAT TTTCAACGAA GCAGCCATGA AGCAAATGCG CTTGGCGCAT CCTATCGGTC AGCTTATTGA ATGGCAGGGT AAACAACTGC GAATCGTTGG TGTAATGAAA GACGCCCTTG TTCAATCGCC CTTCACCCGG GCAAACCCTG GCATGTTCCT TTGCAGGCCG GAGTCGCTCA ACGTTCTTTT GTACCGTATT TCGCCCCGCC TGTCAACCCA GGAAGCCCTC GCCCAGATGA CGGCATTGTT TAACAAATAC AATCCTTCTT ATCCATACAG TTATCAGTTC GCCGATGTTA CCTACGCAGC CAAGTTTAAC CTCGAAACAC TAGTCGGCAA ACTGGCGGGC ATTTTTGCCT GTCTAGCCAT TTTCATTTCA TGCCTGGGGC TATTTGGCCT GGCTTCGTTC ATGGCCGAAC GGCGTACGAA GGAGATTGGC GTGCGTAAAG TGCTGGGTGC ATCCGTGCTG AATGTATGGG GATTGCTCTC GAAGGAATTT GTCTATCTGG TTGGCATCGC CTTTATCATA GCGTCGACGC TAGCATATTA CCTGCTTTCC AACTGGCTAC AGCGGTACGA ATACCGAACA GAAATGTCGT GGTGGATTTT CGCCCTAACG GGTTTGGGAT CTTTGACCGT TACGTTGCTC ACAGTGAGCT ACCAGAGCAT CAAAGCCGCC TTGCTGAATC CGGTAAAGAG TTTGAAAAGC GAATAA
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Protein sequence | MLRNYLKIAW RNLVSQKGYS FINITGLAVG MAVAMLIGLW VYHEYSYDKF LPNYQQLYQV RRNYNSNGDT LTFSSTSLKL ADALRNEIPE IDYVAESDYI GSSHGLKVGD KKFYVNGGQI GSDFLKMFQY PLLEGEASMA LKDPYSIVLT ESTAKALFGN EVPMGKVVRF DNQNDLKVTG ILKDLPKNSS LQFEFLVPFS YFEATASNVR LARSGSFSDN SFQIFVKLKP GVSYAQVAPK IALIEHTETN SVNAMNSVVI LQPLQNWHLY STYQNGKEAG GFIDYVRMFT LIGILVVLIA CINFVNLTTA RSAKRAKEVG IRKAVGSQRQ QLIGQFLTES FLLTFVAFLF SLLVVQLSLP AFNALINGEV SIPYARGEFW LALLSCLLIT ALLAGSVPAF YLSSFQPVKV LKGIMQVGKA ASWPRKALVV AQFSCSIALI LSAVIVFQQI QYAKNRPTGY DVNRLMMTNM NSELGANFTI LKDELLRNGI AESVSQSSSP ATDIWWHSDV EKWPGKNAGE TIEMGTIVVA KDYFKTVGMT LAQGRVFTSK NDTTSVIFNE AAMKQMRLAH PIGQLIEWQG KQLRIVGVMK DALVQSPFTR ANPGMFLCRP ESLNVLLYRI SPRLSTQEAL AQMTALFNKY NPSYPYSYQF ADVTYAAKFN LETLVGKLAG IFACLAIFIS CLGLFGLASF MAERRTKEIG VRKVLGASVL NVWGLLSKEF VYLVGIAFII ASTLAYYLLS NWLQRYEYRT EMSWWIFALT GLGSLTVTLL TVSYQSIKAA LLNPVKSLKS E
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