Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0923 |
Symbol | |
ID | 8724653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1101661 |
End bp | 1102917 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385774 |
Protein GI | 284035844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.808008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA TCTCATTCAT TGCATTACCA CTGGCCCTTG GCCTTTCCTG TGCCGTTAAT CCAGCAGTTC GTTCCCTGTC TTCATCCGTT TCCGAAACTC CCACGACACA ATCGGTACAG GCAAAGAAAC TAATGACAGG GGCCGATCAG GTGGCGGCTT ATCTGCCCTA TCTGAAAGGT AAACGCATTG GTATGGTCGT TAACCAGACG TCCATCATCG GCAGTAAACC CAGCGTCGAT AGTCTGGTGA GTCTGGGCGT GAACATCGTC TCGATCTTCG GACCGGAACA CGGTTTTCGG GGCAATGCCA GCAACGGGGC CAAAGTCGAC GATGCCGTTG ATGCCAAAAC CGGCATTCCG GTCGTTTCGC TGTATGGCAA GAACAAGAAA CCATCCAAAG AACAACTTGC GAACATCGAC TTGATGATTT TCGACATTCA GGACGTGGGT TGCCGGTTTT ACACCTACAT CAATACGCTC AACCACGTGA TGGAGGCTTG CGCGGAAAAC AACAAAGAGC TGATGATACT GGACCGGCCC AACCCGAACG GTTTCATTGT CGACGGGCCT ATTCTGGAAG CTCATCTCTA TTCGGGGATT GGTATGCACC CAATTCCCAT TACGCATGGC TGCACGATTG CCGAATTTGC CCAGATGATC AATGGCGAAG GCTGGGGGGG CGTTGCCAAA ACGAACCCAT GCAAGCTGAA GATTATCAAG CTGGCGAACT ATACACACGA CACACCCTAC ACGCTGCCCG TATTGCCCTC GCCTAATCTG AATACACAGC AATCAATTTT ACTGTACCCC AGCCTTTGCT GGTTCGAAGG AACGATCATC AGCCAGGGCC GGGGCACCTA TATGCCTTTT ACCGTTTTGG GAGCCCCCGC CCTGAAAGGC AAGTATGACT TCTCATTCAA ACCGGTAAGC ATCAAAGGCA TGAGTGAAAC ACCTTTGCAT CAAGATGAGG ATTGCTATGG GCTTGATCTT CGCACCTATG ATACCAACCT GCTGCGCAAA ACAAAACAGC TCAATCTGAA ATGGCTGATG GAGTTATACA AAGCATATCC CGACAAAGCC CGTTTCTTCG ATACGAGTTA CAGCAAACAA ATGGGCAATT TCAACTACCG GAGCGGTAAC GAAGCGCTAA AAAAACAAAT CATTGCGGGC GTTTCCGAAA AGGAAATCCG ACAAAGCTGG GAACCGGGTC TGTCCGCTTA TAAGCAAATA CGGAAGAAGT ATTTGATGTA CCCGTAA
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Protein sequence | MKLISFIALP LALGLSCAVN PAVRSLSSSV SETPTTQSVQ AKKLMTGADQ VAAYLPYLKG KRIGMVVNQT SIIGSKPSVD SLVSLGVNIV SIFGPEHGFR GNASNGAKVD DAVDAKTGIP VVSLYGKNKK PSKEQLANID LMIFDIQDVG CRFYTYINTL NHVMEACAEN NKELMILDRP NPNGFIVDGP ILEAHLYSGI GMHPIPITHG CTIAEFAQMI NGEGWGGVAK TNPCKLKIIK LANYTHDTPY TLPVLPSPNL NTQQSILLYP SLCWFEGTII SQGRGTYMPF TVLGAPALKG KYDFSFKPVS IKGMSETPLH QDEDCYGLDL RTYDTNLLRK TKQLNLKWLM ELYKAYPDKA RFFDTSYSKQ MGNFNYRSGN EALKKQIIAG VSEKEIRQSW EPGLSAYKQI RKKYLMYP
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