Gene Slin_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0923 
Symbol 
ID8724653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1101661 
End bp1102917 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385774 
Protein GI284035844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.808008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA TCTCATTCAT TGCATTACCA CTGGCCCTTG GCCTTTCCTG TGCCGTTAAT 
CCAGCAGTTC GTTCCCTGTC TTCATCCGTT TCCGAAACTC CCACGACACA ATCGGTACAG
GCAAAGAAAC TAATGACAGG GGCCGATCAG GTGGCGGCTT ATCTGCCCTA TCTGAAAGGT
AAACGCATTG GTATGGTCGT TAACCAGACG TCCATCATCG GCAGTAAACC CAGCGTCGAT
AGTCTGGTGA GTCTGGGCGT GAACATCGTC TCGATCTTCG GACCGGAACA CGGTTTTCGG
GGCAATGCCA GCAACGGGGC CAAAGTCGAC GATGCCGTTG ATGCCAAAAC CGGCATTCCG
GTCGTTTCGC TGTATGGCAA GAACAAGAAA CCATCCAAAG AACAACTTGC GAACATCGAC
TTGATGATTT TCGACATTCA GGACGTGGGT TGCCGGTTTT ACACCTACAT CAATACGCTC
AACCACGTGA TGGAGGCTTG CGCGGAAAAC AACAAAGAGC TGATGATACT GGACCGGCCC
AACCCGAACG GTTTCATTGT CGACGGGCCT ATTCTGGAAG CTCATCTCTA TTCGGGGATT
GGTATGCACC CAATTCCCAT TACGCATGGC TGCACGATTG CCGAATTTGC CCAGATGATC
AATGGCGAAG GCTGGGGGGG CGTTGCCAAA ACGAACCCAT GCAAGCTGAA GATTATCAAG
CTGGCGAACT ATACACACGA CACACCCTAC ACGCTGCCCG TATTGCCCTC GCCTAATCTG
AATACACAGC AATCAATTTT ACTGTACCCC AGCCTTTGCT GGTTCGAAGG AACGATCATC
AGCCAGGGCC GGGGCACCTA TATGCCTTTT ACCGTTTTGG GAGCCCCCGC CCTGAAAGGC
AAGTATGACT TCTCATTCAA ACCGGTAAGC ATCAAAGGCA TGAGTGAAAC ACCTTTGCAT
CAAGATGAGG ATTGCTATGG GCTTGATCTT CGCACCTATG ATACCAACCT GCTGCGCAAA
ACAAAACAGC TCAATCTGAA ATGGCTGATG GAGTTATACA AAGCATATCC CGACAAAGCC
CGTTTCTTCG ATACGAGTTA CAGCAAACAA ATGGGCAATT TCAACTACCG GAGCGGTAAC
GAAGCGCTAA AAAAACAAAT CATTGCGGGC GTTTCCGAAA AGGAAATCCG ACAAAGCTGG
GAACCGGGTC TGTCCGCTTA TAAGCAAATA CGGAAGAAGT ATTTGATGTA CCCGTAA
 
Protein sequence
MKLISFIALP LALGLSCAVN PAVRSLSSSV SETPTTQSVQ AKKLMTGADQ VAAYLPYLKG 
KRIGMVVNQT SIIGSKPSVD SLVSLGVNIV SIFGPEHGFR GNASNGAKVD DAVDAKTGIP
VVSLYGKNKK PSKEQLANID LMIFDIQDVG CRFYTYINTL NHVMEACAEN NKELMILDRP
NPNGFIVDGP ILEAHLYSGI GMHPIPITHG CTIAEFAQMI NGEGWGGVAK TNPCKLKIIK
LANYTHDTPY TLPVLPSPNL NTQQSILLYP SLCWFEGTII SQGRGTYMPF TVLGAPALKG
KYDFSFKPVS IKGMSETPLH QDEDCYGLDL RTYDTNLLRK TKQLNLKWLM ELYKAYPDKA
RFFDTSYSKQ MGNFNYRSGN EALKKQIIAG VSEKEIRQSW EPGLSAYKQI RKKYLMYP