| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0917 |
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| Symbol | |
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| ID | 8724647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1090538 |
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| End bp | 1093669 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003385768 |
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| Protein GI | 284035838 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.164104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT TCATCCGAAG TCTGATTACG TTTTCGCTGA CAAATCGATT TGTCGTCTTT
TTTGGTATAC TGCTCCTGGT GGTGGGTGGT GTCGTTAGCT TTTTAAATAC ACCGGTCGAA
ACCTTTCCCG ATGTTACCAA CACAAATGCC ATCGTGATTA CCCAGTGGCC CGGTCGGTCG
GCGGAGGAAA TCGAACGGTT CGTGACGATT CCCCTCGAAA CGGAACTGAA CTCAGTGCCC
CGAAAAACGA CCCTGCGGTC GGTTTCGCTT TTCGGCCTGT CGGTCATTAC CATGATTTTC
GAAGATGGCG TCGACAATTT CACGGCGCAG ACCAATGTCG CGAACCGCAT GGCTAACGTA
ACGCTTCCTG ATGGTGCCAC TGCCGAAGTT GAGCCACCCT ACGGTCCTAC CGGGGAGATC
TACCGGTTCA CGCTGGAAAG CAAAACAAAG GACGTTACCG AACTGAAAAC CCTACAGGAC
TGGGTCGTCG AACGCCAGAT CAAAGCCGTA CCAGGTATCG CCGATGTCGT AAGTTTCGGT
GGGAAAGTCA AAACGATTAA TGTCGATGTG AACCCGACCC TGCTGGCCAA TTACGGCTTT
ACTGCCCTCG ACGTCAGCCA GGCTATTCAG CAAAGTAACA TTAATGTGGG GGGCGATGTG
ATCAAGCAGG GCAATCAGTC GCTGGTGGTG CGGGGTATTG GCCTGCTGAC AAAACCCGAC
GATGTGGCCG GTATTATTAT CGACAATGTC AACGGGGTAC CCATTAAAGT GAAGGATGTA
GCGGTTGTTC GGGAGGGATT TCAGCCCAGG CTGGGCATTG TGGGGCGCGA TGCCCAGGAC
GACGTGGTGG AATGTATCGT GGTGATGCGC AAAGGAGAAA ACCCCAACGA GGTAATTCCA
GCCCTAAAGG CCAAAATCGA GGAACTGAAC ACCCAGGTGT TACCCCACGA TGTCAAAATC
AAAACTTTTT ACGACCGGAC CACCCTGAAT GACTATACTC TCCACACCGT GGGGGAAAAC
GTGCTGACCG GTATTTTTCT GGTTACGCTG ATTCTGCTCA TTTTTCTGGC CGACTGGCGC
ACCACGCTGA CCGTAGCGCT GGTGATACCG CTGGCACTGC TCTTTGCCTT TATCTGCCTG
CGGGCGCGGG GCATGACCGC CAACCTGCTG AGTATTGGCG CACTAGACTT CGGTATCATC
ATCGACGGGG GCGTAGTCAT GGTCGAAGGG GTATTCGTTA TGCTGGCTCA CCGGGCCGAA
AAAATGGGCA TGATGCGCTT TAACAACCGG GCCAAGCTGA GCTGGATTGT CTCCACCGCC
ACCGAGTTGG GTAAGTCGAT CTTCACCTCG AAAATTATCA TCATCACGGC CCTCCTGCCC
ATATTCGCCT TTCAGAAGGT TGAAGGGAAG CTCTTTAGCC CCCTGGCCTG GACAATTGGC
TTTGCCCTGT TGGGGGCGAT GATTGTGAGC CTGACACTCA TTCCGTTGCT GTGCGCGCTG
TTGCTCAAAA AGAACGTACG GGAACGGAAT AATCCGATTG TGAATGGTCT GGAGCGTGGC
TATACGCCCG CCCTGGCCTG GGCCATACGT AAGCCCCGGG TTATCATAGG TATCGGGTTG
GGTGCGCTGG CGTTTGCCAT TTATATATTC CTGGCTCGTA TTGGTTCGGA ATTTTTGCCG
CAGCTGAACG AAGGCTCTAT CTACGTACGG GCTTCGCTGC CCTACTCCGT GTCGCTTGAC
GAAAGTTACG CCTATACGCG CCGGTTCCGG GCAATCTTCA AAGAGTTTCC GGAAGTGCGG
GGTGTTATTT CACAAACCGG CCGCCCCAAC GACGGAACCG ATCCGACCGG TTTTTTCAAT
AACGAATTCT TTGTGGACCT ATACCCCAAA GAAGACTGGA AGCGGGACAT TAGCAAGGAA
GAACTGATTC GGGAGATGCA GCAAAAGCTG GCCCGGTTCC GGGGTGTTGA CTTTAACTTT
TCGCAACCCA TCTCCGACAA CGTGGAAGAA GCGGTGTCGG GCGTAAAGGG CTCGATGGCG
ATTAAGATTG TCGGACAGGA TTTGACCGTA CTGGATCAAC AGGCGACAAA AGCCTTAGCG
GTGATGAAGC AGATTAAAGG CGTTGAGGAC CTGGGGGTGT TTCGCAACCT GGGGCAGCCC
GAGTTCCGGA TTACACTGGA CCCGGCCCGG CTGGCGCAGT ATAATGTTCC GACCGACGTA
GTGCAGTCGG TCATTGAAAC GGCCATTGGC GGCAAAACTG CTACGCAGTT TTACGAGGGC
GAACGGCGCT TCGATATAAA AGTGCGCTAC GACGAACGCT TTCGTTACTC GCCCGATCTG
ATTGCTAATC TACTCGTACC GACGCGCTCG GGCTCAAAAA TACCCCTGAA AGAACTGGCC
GATATTGGTA CCCGATCCGG ACCGGCTTTT GTGTACCGCG AAAATAACGC CCGCTTTATT
GCCATTAAGT TTTCCGTCCG GGGACGCGAC CTGGGTAGTA CTATTGCCGA AGCCCAGAAA
AAAATGAGTC AGGTGATTAA ACTGCCAGCG GGGTATCAGT TACGCTGGGC GGGCGAGTTT
GAGAACCAGA CGCGAGCCGA AAAGACCCTG ATGATCGTAG TACCGATTTC CATTACCATC
ATTTTCCTGA TTCTGCTGTT CACATTCGGT AGCCCGATTG ATGCCACGCT GATCATTCTC
AACGTGCCTT TCGCCCTCAT CGGTGGCATT CTGGCCCTCT GGCTTACTGG TATCAACTTC
AGTATTTCGG CGGGTGTAGG GTTTATCTGT CTTTTTGGGG TGTCGGTACA GGATGGGGTT
ATTCTTATTA ACCGATTCAA AGAAAATCTT AAGGAGAAAA TGCCCATTCT GGAGGCCGTT
CGGGAAGGAG CCCAGACACG GGTTCGGCCC GTTGTTATGA CTGCCCTGAT GGCATCGCTC
GGGCTGTTAC CAGCCGCCCT GAGCACCGGT ATCGGCTCAG AAACCCAAAA GCCACTGGCT
ACCGTCATGA TTGGTGGTCT GATGACCTGT ACCGTCCTGT CGCTATTAAT TCTGCCCGTC
ATGTATAACC TGATTCACGG TCGTCGGGCA GAGAAAAAAG CCGACCAGAA AAAACAGCCT
GCTGACAGGT GA
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| Protein sequence | MNTFIRSLIT FSLTNRFVVF FGILLLVVGG VVSFLNTPVE TFPDVTNTNA IVITQWPGRS
AEEIERFVTI PLETELNSVP RKTTLRSVSL FGLSVITMIF EDGVDNFTAQ TNVANRMANV
TLPDGATAEV EPPYGPTGEI YRFTLESKTK DVTELKTLQD WVVERQIKAV PGIADVVSFG
GKVKTINVDV NPTLLANYGF TALDVSQAIQ QSNINVGGDV IKQGNQSLVV RGIGLLTKPD
DVAGIIIDNV NGVPIKVKDV AVVREGFQPR LGIVGRDAQD DVVECIVVMR KGENPNEVIP
ALKAKIEELN TQVLPHDVKI KTFYDRTTLN DYTLHTVGEN VLTGIFLVTL ILLIFLADWR
TTLTVALVIP LALLFAFICL RARGMTANLL SIGALDFGII IDGGVVMVEG VFVMLAHRAE
KMGMMRFNNR AKLSWIVSTA TELGKSIFTS KIIIITALLP IFAFQKVEGK LFSPLAWTIG
FALLGAMIVS LTLIPLLCAL LLKKNVRERN NPIVNGLERG YTPALAWAIR KPRVIIGIGL
GALAFAIYIF LARIGSEFLP QLNEGSIYVR ASLPYSVSLD ESYAYTRRFR AIFKEFPEVR
GVISQTGRPN DGTDPTGFFN NEFFVDLYPK EDWKRDISKE ELIREMQQKL ARFRGVDFNF
SQPISDNVEE AVSGVKGSMA IKIVGQDLTV LDQQATKALA VMKQIKGVED LGVFRNLGQP
EFRITLDPAR LAQYNVPTDV VQSVIETAIG GKTATQFYEG ERRFDIKVRY DERFRYSPDL
IANLLVPTRS GSKIPLKELA DIGTRSGPAF VYRENNARFI AIKFSVRGRD LGSTIAEAQK
KMSQVIKLPA GYQLRWAGEF ENQTRAEKTL MIVVPISITI IFLILLFTFG SPIDATLIIL
NVPFALIGGI LALWLTGINF SISAGVGFIC LFGVSVQDGV ILINRFKENL KEKMPILEAV
REGAQTRVRP VVMTALMASL GLLPAALSTG IGSETQKPLA TVMIGGLMTC TVLSLLILPV
MYNLIHGRRA EKKADQKKQP ADR
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