| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0915 |
|---|
| Symbol | |
|---|
| ID | 8724645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1089042 |
|---|
| End bp | 1089665 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003385766 |
|---|
| Protein GI | 284035836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.275213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTT GCGTGTCGCC TGTGCGGGTC AGCAGGGGCG ACACGCAGAA AATCTCTAAC
CAATCTTTCA AATCAATAAA TTTAATAGCC ATGAAAACTA TTCTTTTCGC ACTGGTGCTG
TTTGATCTGA CATCAGGAGT CGTTCTGGCG CAAGGCCCTG GAGATAAAGT TGTTACCATT
GCTCGGGTCA AAAAAGGGGA GGAGCCACAG GAGGTTATGA CGATATTGAA AAATGATTTC
CCCGATGCCA TCGTCAAGGA CATTGCTTTT TTACCCAAAG CGTTAAACAA CCGGGAGTGG
GCCGTTAAGG AACTGGATAA CAGCGGCTCG GCAGACGTGC GCTTCTACGA TGTACAGGCG
TCGAGTGATA ACATGAAGTT TGAGGCCGTG TATGATAGAA CAGGTAAGCT GCTCAGTTTC
AAAGAAACGC TTAATCAAGC TACCCTGCCG GAACCCGTCA TGAATACGCT TAACGAACAA
TTTTCGGGCT GGCGGGTACT TGGTAATCAG GAGCGCCTTA AAATAAACTC GAAAACGACT
AAGATTGTCT ACCGTGTCGA ACTGGCAAAA GCTAAAACAG AAAAACACGT ATATCTCGAC
GACAACGGAA AGGTCCTTCG TTAG
|
|---|
| Protein sequence | MSACVSPVRV SRGDTQKISN QSFKSINLIA MKTILFALVL FDLTSGVVLA QGPGDKVVTI
ARVKKGEEPQ EVMTILKNDF PDAIVKDIAF LPKALNNREW AVKELDNSGS ADVRFYDVQA
SSDNMKFEAV YDRTGKLLSF KETLNQATLP EPVMNTLNEQ FSGWRVLGNQ ERLKINSKTT
KIVYRVELAK AKTEKHVYLD DNGKVLR
|
|---|
| |