Gene Slin_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0866 
Symbol 
ID8724596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1041545 
End bp1042180 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003385720 
Protein GI284035790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC CTGACATAAG CCATCCATTA CAAAGTACCC GGGAGAAAAC GGACGAAACC 
TTGCTTTGGC AGCAGTTCAG GGAAGGGCAG CAGGAAGCCT TTCAGGGGAT GGTTCAGCAC
TTTTACCGGG AGCTTCACTT TTATGGTGGC CGGTTCACCC GTGATTCTGA TCTGCTGAAA
GACTGCTTGC AGGATCTATT TATGGATTTA TGGATCTATA GGCATAAAAT TGTACAAACC
CCTTACATCC GGCCTTATCT CTACAAATCA TTACGACGGA AGATCCATCG GGAAGTGATA
CGCCATTCTG CCATAATTAG CGAAGACAGT ATTCTCTTCG ATGATGTAAG CTCTGAAGAG
ATTACCGCCG ACCAGGCCCT GATTCGCACC GAGTTGTCTG AGTACCAGAC TGCCCGGCTG
AATGCACTCC TGGCAACTCT ATCCGATCGG CAGCGGGAAG CTATCCACTT GAAGTTTTAT
GCTGAATTGT CTAATCATGA AATCGCTGAT ATTCTGACGG TCAATAAACA ATCGGTTGCG
AATCTACTAC ATCGGGGCCT AAGTCGATTA CGGGAAAGCT GGCCCTCATT GCTGTCATTG
CTCGGCTGGC TATTGAACGA GTCGTTACCA AAATAA
 
Protein sequence
MLKPDISHPL QSTREKTDET LLWQQFREGQ QEAFQGMVQH FYRELHFYGG RFTRDSDLLK 
DCLQDLFMDL WIYRHKIVQT PYIRPYLYKS LRRKIHREVI RHSAIISEDS ILFDDVSSEE
ITADQALIRT ELSEYQTARL NALLATLSDR QREAIHLKFY AELSNHEIAD ILTVNKQSVA
NLLHRGLSRL RESWPSLLSL LGWLLNESLP K