| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0858 |
|---|
| Symbol | |
|---|
| ID | 8724588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1035656 |
|---|
| End bp | 1036705 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003385714 |
|---|
| Protein GI | 284035784 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA CCTTATGTTT TCTGGCTACC TATCAGTGTA ATGCCAAATG TGATTTCTGC
GAGTGTCGGC CTACGGTCAA AGATCGCATC GAGTTAAGCG AAATGATTCG CCTGATCGAC
GAAGCCTACG CGTTAGGAAC TGTCTATGTC GTGGTCTTCT CCGGAGGAGA ACCCACTTTA
CTCAAGGACG ATTTACTGAA AGCCATTCAG CACGCCACCA GTAAAGGGTT ATTAACCCGA
GTGGTGACCA ATGGCTGGTG GGGAGGTAAG CGTATCGAGC AGGGGCGTGC CTATCTGGAC
AAGTTGATCC AAGCCGGCTT GTCAGAAATC AACATTAGTG TGGACGATTT ACATCAGGAA
TGGATTGACA TCGAGCATGT CAAAAATGCC TTTCTAGCTT GTTATGAGCG CCGGTTCCGC
TGTTTGATTG CTCATAAACA GACCAGGCAG TCGAAGATTA CCAAGAGCTA TCTGGAAGCG
TACTTTGGAG TTGACTTAGT GGATTATGAT GCCAGTCGGC AGTACAGTGA GGACGAACAA
GCCCGCTTGA TATCTACCAG TGTCGTTGTA CCCGTGGGCC CGGTCAACGC CGGTAAGGAA
GCGGACTATG AACCCGAGAA TTTGTTGTCT TTAGATTGGA CCAGGAGCTG TGGCTCGGTT
TTAAGGGACA TTATTATTGG GGCCAAAGGT AATTTTTTAC CCTGTTGTGG GTTTGTGACC
AAAAACACCC CTGAGTTAAC GCGGGAGGAT TTGCGCCAGA GCACCTTGCT GGATGCTATT
GATAATGCGA ACAGGGATTT GATGTTAAAT TGGATTGCCT TGGAGGGTCC AGCCGCCATG
GCCAAGTTTG CCCAAAGCAA GAACCCCTCC ATTCATCTGG AGTCAAGTTA CACCTCAATC
TGTCACATCT GTAATGAGGT ATTGACGCGT AATGATATCC GCCAAGCCAT TGCTGACAAT
CTGGAAGAGA TCAAGCAGCG GGTAGCCTAT CAGCGCGTAT TTCTGGAAAA AGCGCGAACG
GATCAGGAGG TTGTGAAAGC CTTTCTGTAA
|
|---|
| Protein sequence | MIKTLCFLAT YQCNAKCDFC ECRPTVKDRI ELSEMIRLID EAYALGTVYV VVFSGGEPTL
LKDDLLKAIQ HATSKGLLTR VVTNGWWGGK RIEQGRAYLD KLIQAGLSEI NISVDDLHQE
WIDIEHVKNA FLACYERRFR CLIAHKQTRQ SKITKSYLEA YFGVDLVDYD ASRQYSEDEQ
ARLISTSVVV PVGPVNAGKE ADYEPENLLS LDWTRSCGSV LRDIIIGAKG NFLPCCGFVT
KNTPELTRED LRQSTLLDAI DNANRDLMLN WIALEGPAAM AKFAQSKNPS IHLESSYTSI
CHICNEVLTR NDIRQAIADN LEEIKQRVAY QRVFLEKART DQEVVKAFL
|
|---|
| |