Gene Slin_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0847 
Symbol 
ID8724578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1025274 
End bp1026197 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content56% 
IMG OID 
Productdomain of unknown function DUF1731 
Protein accessionYP_003385704 
Protein GI284035774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.120266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA ACCACCAACA AACCCACCAT ATCTTAATAA CCGGCGGCAA TGGCCTGGTT 
GGCAATTCGT TAACCCAGGC CTTGCTCCGG GAAGGGCACC GGGTTAGCCA CCTGAGCCGT
ACCCCATCCA TCATTGCTGA CGTCACAACC TACGGCTGGA ACGTTGTGAA TCAACAGATT
GATGCGCGTT GCCTGGACGG AGTCGATACG ATTATTCATC TGGCGGGTGC GGACATCGCC
GATGAGACCT GGACGCCCGC CCGCAAGCTG GAAATTAGCC GCAGCCGTAC CGAATCGATC
CGGCTCCTCT ACCGATTGAT GCGTGAACGA CCTCATGCCG TCAAATCGGT TATCTCAGCC
TCGGGCATCG CGTTCTACGG TGACCGATCC GATGAAATCC TAACCGAGCA AAGCCATCCA
TCGCCCGATT TTCTGGGGAC GGTCTGCCAG GAATGGGAGT CGGCAGTTGG TGAAGGGAAA
GCTCTGGGCC TGCGCGTGGT TATTTTTCGT ACGGGAGTCG TCCTCACCAA AGAGGGTGGG
GCGTTGGCGT CCTTAGTGCC AATGATCCAG TCGGGTTTTG GGGCAACAAT CGGCAGCGGT
CGCCAGTGGG TTCCCTGGAT ACACCTGCAG GATGTGGTGG GACTGTATGG CCTGGCGGTT
CGGGACAGCT CGCTGGCTGG TGTATTCAAC CAAACGGCTC CGGGTCTGCT CACCAATCGG
CACTTTATGG AAGCCCTGGC CCGGCACTTT CACAAACGGC TGTGGATGCC TTCCATTCCG
GCTTTCATGC TAAAATTAAT GATGGGGGAA CGCAGTGCTT TTGTCCTCAA TAGTGCCAGG
GCTGTCCCAC CCGAACAGCT TCGACAAGAA TATCGATATC TGTATCCTAC CCTTGATCAA
GCACTGAGCG ATATTTATGC GTAA
 
Protein sequence
MKNNHQQTHH ILITGGNGLV GNSLTQALLR EGHRVSHLSR TPSIIADVTT YGWNVVNQQI 
DARCLDGVDT IIHLAGADIA DETWTPARKL EISRSRTESI RLLYRLMRER PHAVKSVISA
SGIAFYGDRS DEILTEQSHP SPDFLGTVCQ EWESAVGEGK ALGLRVVIFR TGVVLTKEGG
ALASLVPMIQ SGFGATIGSG RQWVPWIHLQ DVVGLYGLAV RDSSLAGVFN QTAPGLLTNR
HFMEALARHF HKRLWMPSIP AFMLKLMMGE RSAFVLNSAR AVPPEQLRQE YRYLYPTLDQ
ALSDIYA