| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0844 |
|---|
| Symbol | |
|---|
| ID | 8724575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1020795 |
|---|
| End bp | 1021802 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_003385702 |
|---|
| Protein GI | 284035772 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAC ATTACTTTGT GGGCATTGAT GTATCAAAAG CTACGCTCGA TTGGGCGGTT
TTTAATGGTA AAACGATAGT CTTACAAACT CAGTCACTTA ACTCTGTGGT GGCTATCAAA
GCGACCATCA AAGTGCTCAA GGCACTGCCT AACTTTGATC TTCAACGATG TATATGTTGT
CTCGAACATA CAGGAATCTA CAATGCTCTT ATTCTTGATC AACTGATAGC TCATCAACTA
CCAACTTGGT TAGAAGGCAG TCTTCAAATC AAACAGGCAG GTGGATTACA GCGTGGGAAA
AGTGATAGCA TTGATGCTCA GCGTATCGCC GAATATGCCT ATCGTTTTCG TGATCGCATA
CGTTTGTGGC AACCACCCCG TTATGTGCTC CAAGAGTTAC TCATACTCAG TGCTTTACGG
CAGCGGTTGT TGTTGATTCG GCAACAGTTA CAAGTACCGG TTAATGAACA AGCCGCTTTT
GTCTCACCTA AACTTCAGAA GCAACTGACT AAACATTGCC AGGCATCCTT GAAGGCGGTC
AATGCTGATC TGGAAAAAGT CAATCAGCAA ATGGATGAAC TAATCCACCA AGACGAACAG
CTCTGTGAAC TCTTTAAGCT CATTACTTCC ATTCCTGGAG TTGGACCAGC TGTTGCCACA
GAAGTCATTT TGGCTACGGA CGAGTTTAAG AACTTTGCTG AGCCCAAAAA GTTAGCTTGT
CACGCCGGGG TTGCTCCTTT TGAACATAGT TCTGGTACTA GTGTCCGAGG TCGAAGTCGT
GTTAGTCAGC ACGCTCGTAA ACGGCTTAAG TTCTTGTTTC ACCTGGCCGC TATGTCAGCT
GTCCGCGTAA AAGGTGAGCT GCAAATCTAT TATCAACGCA AAGTGGCTGA AGGTAAAAAC
AAGATGTCCG TTTTAAATGC TATCCGGAAC AAGATTATAC ACCGAATTTG CGCCGTAGTT
CGCCGTGGGG AAAAATATGA CAATTCTTAT CCCCTTTCCC TTGCATAG
|
|---|
| Protein sequence | METHYFVGID VSKATLDWAV FNGKTIVLQT QSLNSVVAIK ATIKVLKALP NFDLQRCICC
LEHTGIYNAL ILDQLIAHQL PTWLEGSLQI KQAGGLQRGK SDSIDAQRIA EYAYRFRDRI
RLWQPPRYVL QELLILSALR QRLLLIRQQL QVPVNEQAAF VSPKLQKQLT KHCQASLKAV
NADLEKVNQQ MDELIHQDEQ LCELFKLITS IPGVGPAVAT EVILATDEFK NFAEPKKLAC
HAGVAPFEHS SGTSVRGRSR VSQHARKRLK FLFHLAAMSA VRVKGELQIY YQRKVAEGKN
KMSVLNAIRN KIIHRICAVV RRGEKYDNSY PLSLA
|
|---|
| |