Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0835 |
Symbol | |
ID | 8724566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1011545 |
End bp | 1012750 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | putative esterase |
Protein accession | YP_003385693 |
Protein GI | 284035763 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.280686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCTG AACGCTACCC AATTGTTACC CTAAAATCCG TTAACTTAAC CAATATGTTT ACCCGTACCC TGACCATTTG TTTCCTGTTG TCAGCCCTCT CCCTTCAGGC ACAGAATGCC GCCAGACTCG TTTCACCCGA AGTTTTACCC GATCAATCCG TCATTTTCAG ATTGAAGTCG CCAACGGCTA AGAACGTGCA GGTGGTAGGC TCCTGGAAAG CGGATAAGCC CATACCGATG ACCAGGATTG ATTCGGTCAC GTATGAAGCT AAAATAGGTC CCCTGCCCAC CGACATATAT GAGTACCGAT TCAACGTTGA CGGTACGATG ACTCTAGATC CCGGTAACGG CTTCGTCACG ACGGGCGGCA CGGTGGTCGA AAGCCGGGTG TTGATTCCCG GAAAACTGGG CAACCTCCTG GCGACGCAAC CAGTGCCCCA CGGCAATGTG ACGGCCGTCT GGTACCCCTC GCCTACCCTG GGAGCCACCC GACGCATGCA GGTCTACACC CCACCCGGTT ATGAAGAAGG AAAAGGAACC TATCCCGTGC TCTATCTCTT ACACGGAGCT GGTGGCGACG AAGAAAGCTG GATTAGTCGC GGGCGGGCCA ATTACATTCT GGACAACCTC ATTGCGGCTA AAGAAGCCGT GCCCATGATT GTTGTTATTA CCAATGGCAA CCCCGATGTG GTTTCGTCTC CTCTGAACCG CCCTCTTGCC GAGAGCACCA AAGACGCTTC GGGGCCTGCG GGCATGGCAT CGCTGAAGTT TGAAGAGAGT CTGGTAAACG ATGTGATTCC GTACATTGAA AAGCATTACC GGGTGAAGGC CGATGCCGAT CATCGGGCGC TAACGGGTTT CTCCATGGGA GGCTATCAAA CGCAGAATAT CAGCAACAAA TACCCCAACC TGTTCAAGTA TATTGGCGTG ATGAGCATGG GGTTATTTTC GTCGTACCGA AACAGCCAGC CGAATTACGA TAAGGAAAAA CACGTTGCCC AGCTCAAAGC ACTGATGGCT GCCAAGCCCA GATTTTACTG GGTGGGCATT GGCAAGGCTG ACTTTTTGTA TGATTCGGTG ACCAAACTGC GCGGCCTCTA TGATGAGGTT GGCCTTCCGT ACACCTACCG GGAAACCCCT GGCGCGCACA CCTGGAACGA ATGGCGGCTC TATCTAACCG AACTGGCCCC GCACTATTTC AAGTAA
|
Protein sequence | MKPERYPIVT LKSVNLTNMF TRTLTICFLL SALSLQAQNA ARLVSPEVLP DQSVIFRLKS PTAKNVQVVG SWKADKPIPM TRIDSVTYEA KIGPLPTDIY EYRFNVDGTM TLDPGNGFVT TGGTVVESRV LIPGKLGNLL ATQPVPHGNV TAVWYPSPTL GATRRMQVYT PPGYEEGKGT YPVLYLLHGA GGDEESWISR GRANYILDNL IAAKEAVPMI VVITNGNPDV VSSPLNRPLA ESTKDASGPA GMASLKFEES LVNDVIPYIE KHYRVKADAD HRALTGFSMG GYQTQNISNK YPNLFKYIGV MSMGLFSSYR NSQPNYDKEK HVAQLKALMA AKPRFYWVGI GKADFLYDSV TKLRGLYDEV GLPYTYRETP GAHTWNEWRL YLTELAPHYF K
|
| |