Gene Slin_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0831 
Symbol 
ID8724562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1008592 
End bp1009860 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003385691 
Protein GI284035761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.146809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCC TACCACAAGT CTTTCTGATT ACCTTTCTTA CCTCCCAGGT GTTGACAACC 
GCAAACGCCC AAACTCCGGG GCAGAAACTC GACCGGTTCG TCGCCAAACT GATCCAAAAC
CAGAAATTTA GCGGTACTAT TCTGGTCGCT GAACAGGGAA AAACAGTGTA TCAAAAGTCG
GCTGGGTACG CTGATTTTTC AACCAAAGTA CCCAATACGC AGGATATCGC CTTTCCCATT
GCTTCCCTTT CCAAAACCTT AACGGCCATT AGTATTCTCC AACTCATGGA ACAGGGTAAG
GTTAACATCG ATACGCCTGT ATCGAACTAT TTGCCCAGTT TCCCCTATGC TCAAATCACA
GTTCGGCACC TTCTTTCGCA TACCTCAGGA TTGCCCCCTT ATAATGCCTA TTTCAACCCG
ATCCGGGCAA AGGATTCCAG TAAAATATTC ACCAACATCG ATTTTCTGCC AGCCGTAGTC
TCGGGCAAGA ATCCGTTGAT CTATTCACCC GGCGAAAAAG GCAATTACGA TAACGTGAAC
TACATTGTAT TAGCCCTACT CATCGAACGT CTTTCAGGAC TCTCGTATGC GGAGTACATC
CAGCGTTACC TGCTGGAGCC AGCGGGCATG AAGCACACCT GGTTTATGCC CCTTGCTCAA
CAATTTAACA CCGATACCCT CGCTCACTTT GCTTATCCGC ATCTGTATCT GCGAGTCTAC
GATGATAGGC CCACTCGCTC CAACACAGTT CCTTACATCA GAAACTATTG GAAAACATTT
GCTCTGACCG GATTCGGCGA TTACATCAGC ACAGTTGAAG ATATCCTACT GTATGATAAA
GCCCTGTATG AAAACCGGTT GCTCAAGGCG GAGACCTTAC GGGAGGCCTT CCGGCCGGTA
CTGTTAACCA ACGGCAAGCC TCATCCAGAC CTTTTTGGCC TTGGCTGGGA GGTAGAGGCT
GACACCAGTT TGGGGCAGGT GGTTTACCAT AGCGGAGCGG CCATCAGCCT AAGCTGTGTC
ATGATCCGAA ATCTAATCAG GCATCAAACG GTCATTCTCT TCGACAATAC CCATTTCAAT
GCGCACGAGG TGGGGACAAA ACTACTGAAG ATACTGAATG GTCAGCCCGT GGCATTGCCT
AAAAAAAGCC TCGCGCACCT CTACGGGCTA ACCCTGTTGA AACAAGGCGA GATCAGAGCC
CGAAATGAGA TGAACAGGCT GAAAAAAGAC ACACGGACTT ATTTATCTGA GCGAACAAGA
GTTAAATGA
 
Protein sequence
MLRLPQVFLI TFLTSQVLTT ANAQTPGQKL DRFVAKLIQN QKFSGTILVA EQGKTVYQKS 
AGYADFSTKV PNTQDIAFPI ASLSKTLTAI SILQLMEQGK VNIDTPVSNY LPSFPYAQIT
VRHLLSHTSG LPPYNAYFNP IRAKDSSKIF TNIDFLPAVV SGKNPLIYSP GEKGNYDNVN
YIVLALLIER LSGLSYAEYI QRYLLEPAGM KHTWFMPLAQ QFNTDTLAHF AYPHLYLRVY
DDRPTRSNTV PYIRNYWKTF ALTGFGDYIS TVEDILLYDK ALYENRLLKA ETLREAFRPV
LLTNGKPHPD LFGLGWEVEA DTSLGQVVYH SGAAISLSCV MIRNLIRHQT VILFDNTHFN
AHEVGTKLLK ILNGQPVALP KKSLAHLYGL TLLKQGEIRA RNEMNRLKKD TRTYLSERTR
VK