| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0822 |
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| Symbol | |
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| ID | 8724553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 999131 |
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| End bp | 1000303 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003385683 |
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| Protein GI | 284035753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.633382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTTAC TCAGTACCTC ACTTAAACCT GCCTCGTTTT CTTTAGCCAT CCTTCTTTCG
CTGAGCCAGT TTGGTTGTGG CTCATCAACC AGCGAAACGG CTACGACGGC TGACGTGCTA
ACGCTACCCG TCGTGCAGGT TAAAACAGCA TCTGTCACGA CGTATCAGGA GTTTTCGGCC
ACCCTGGAAG GGCGCGTCAA CGTCGATATC CGGCCTCAGG TAGAGGGCTA TCTGGAAAAA
ATTTATGTCG ATGAAGGGGC GGCCGTTCGG AAAGGTCAGC CCCTGTTTCG CATCGATACG
CGGACCTATC AGCAGCAGGT CGGCAATGCC AGCGCCAGTC TGCTGGTGGC AAAAGCCAAC
CTGGATAAAG CCGCGCTGGA AGTGGCCCGA CTAACGCCGT TGGTCGAAAA CAACGTCGTG
TCGGATGTGC AGCTTAAAAC GGCTCAGTCG GCTTACGCGG CTGCCAAAGC CAACGTCGAA
CAGGCGCGTT CGGTGGTGGG CAACGCCAGT GTCAACCTTA ACCGGACCCT GATCACGGCC
CCCGCGAGCG GGTTCATTGG CCGCTTACCC TACAAGGCAG GTAGCCTTGT AGGCCGTACT
GAACTGCAAC CCCTGACGAC ACTTTCAGAC GTACACGAAA TCGTTGCCTA TTTCTCTATG
AGCGAGGTCG ACTTCCTACA TTTTACAGAA CGATCATTGG GTAAGAGTCT GGCGGACAAG
ATTAAAAAAC TACCTCCCGT CGATCTGGTT TTGGCCGATG GCAAGGCGTA TGCGCAGAAA
GGCCGAATCG AACTGGTAAC GGGGCAATTC GACAAAACGA TGGGCTCCAT TAGCTTCCGG
GCCGTTTTTC CAAATGCCGA GGGGTTGCTA CGGTCCGGCA TCACCGGGCG CGTGCGTATT
CCGCAAACGC ATCCGCTGGC GGTTGTCGTA CCGCAGGAAG CTACGTTCGA GCGGCAGGAT
CGGGTGTTCG TTTATGCCTT GGCCGACAGC AATAAAGTGG TGAGTAAGCC CCTCCAGATT
GCAAGCAAAA GCGGCAATTT TTACCTAATC ACGAAGGGTA TTCAGCCCGG CGAACGCATC
GTTCGGCAAG GGCTGGACCG GCTTCGTGAC GGCGATGTAA TTAACCCGCG ACTGGTTGCC
ACCGACAGCC TGACAGCCGC CCGCGTGCAG TAA
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| Protein sequence | MCLLSTSLKP ASFSLAILLS LSQFGCGSST SETATTADVL TLPVVQVKTA SVTTYQEFSA
TLEGRVNVDI RPQVEGYLEK IYVDEGAAVR KGQPLFRIDT RTYQQQVGNA SASLLVAKAN
LDKAALEVAR LTPLVENNVV SDVQLKTAQS AYAAAKANVE QARSVVGNAS VNLNRTLITA
PASGFIGRLP YKAGSLVGRT ELQPLTTLSD VHEIVAYFSM SEVDFLHFTE RSLGKSLADK
IKKLPPVDLV LADGKAYAQK GRIELVTGQF DKTMGSISFR AVFPNAEGLL RSGITGRVRI
PQTHPLAVVV PQEATFERQD RVFVYALADS NKVVSKPLQI ASKSGNFYLI TKGIQPGERI
VRQGLDRLRD GDVINPRLVA TDSLTAARVQ
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