| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0820 |
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| Symbol | |
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| ID | 8724551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 994448 |
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| End bp | 995875 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003385681 |
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| Protein GI | 284035751 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.127613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.415526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGAC TCTATTCTTC GTCCTCTTTC TTCGTAATCA GTATACTCGC GCTTGCCCTG
CTTGTCTCAG GTTGTAAAGT TGGCCAACAT TACCAGCGGC CAACAACGCA AATGCCGGAG
CAGTTTAGGG GGCGTAGCCA ATCCGACACC ACCAGCGTCG CGCTGATTCC CTGGCGACAG
TTCTTTCGGG ATACCGAGTT GCAGAATCTG ATCGGAACGG CGCTGACCAA CAACTTCGAT
TTGCAGGTAG CCCTTAAACG GATCGAGGAA AACCAGGCCT ATGTTCGCCA GACGCGGTAC
GCGCTGTTGC CCGCCGTTAA CGCGCAAATC GCGGCCTCAA CGGTGACGCC ATCGCGAAAC
AGCCTGAATG GCCTGAGTCT GGAAAATTTT ATCGGCACCC GACATCTGGA AGATTTCTCG
ACTAACCTTT CATTATCCTG GGAAATAGAC ATCTGGGGAC GAATCCGGCG GCAGAACGAA
GCCACCCTAG CCCAATTTCT GCAAACCGAA GAAGCCGCCA AAGCGGTACG TACCAATCTG
GTAGCTTCTG TCGCAACGGG TTATTTTAAC GTCTTGCTAC TGGATGCTCA ACTGGACGTA
GCGAAGCGGA ACGTAGCCCT GGGCGATTCC ATCGTGCGGC TGATCCGGTT TCAGAAGAAG
TCGGGCGACG TAACGGAACT AGCCGTACAA CAGGCCGAAG CCCAGCGGCA AGCGGCCGAC
CTGCTACGGT CGCAGTTGGA ACAGGCACTG GTCATCGAAC AAAACGGCAT TCGGCACTTA
CTGGGGGACT GGCCGGGCGC TATTGCCCGG AGCAGTCGGC TCACCACCTA TCCCGTCGCT
GATACGCTGC TGACGGGCGT ACCGGCACAA TTGCTCGCCA ATCGGCCCGA TGTGCGGATG
AGCGAGTTGG GACTGGTAGC GGCCAATGCC CGGGCTGGCG TTGCCGAAGC CAGTTTGTAC
CCAGCCCTGA CCATTACGGG GAGCGGTGGC TTGAATTCCT TTCGGGCCGT AAACTGGTTT
GCGCTGCCTA CCTCACTGTT CTACAATCTG GCAGCGGGTC TGGTGCAGCC TGTTTTTCAA
CGCCGTCAGC TCCAGACGCA GCTGGAAGTG AGCCAGATTC AGCGGGAGTC GGCTCTGATA
CAGTTTCGCC AGAGCCTGAC GACTGCCGTT ACCGACGTGT CGAATGCGTT GGTTCGGAAC
GAGAAGTTGC AGGAGCAGGA ACGAATTGCT ACAAAACGTG CCCAAACGGT ACAGGGAGCC
ATTACCAATG CTAAACTTCT GTTTAAGAGC GGAATGGCCA CCTATCTAGA GGTGATCACG
GCGCAAAGTA ACGCCCTTCA GGCGGAACTC ACCTTAGCCG ACATCAAACG GCAACGCCTG
GGAGCGATGG TCGACGTCTA TCGGTCGCTG GGGGGCGGCT GGCGGTAG
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| Protein sequence | MSRLYSSSSF FVISILALAL LVSGCKVGQH YQRPTTQMPE QFRGRSQSDT TSVALIPWRQ
FFRDTELQNL IGTALTNNFD LQVALKRIEE NQAYVRQTRY ALLPAVNAQI AASTVTPSRN
SLNGLSLENF IGTRHLEDFS TNLSLSWEID IWGRIRRQNE ATLAQFLQTE EAAKAVRTNL
VASVATGYFN VLLLDAQLDV AKRNVALGDS IVRLIRFQKK SGDVTELAVQ QAEAQRQAAD
LLRSQLEQAL VIEQNGIRHL LGDWPGAIAR SSRLTTYPVA DTLLTGVPAQ LLANRPDVRM
SELGLVAANA RAGVAEASLY PALTITGSGG LNSFRAVNWF ALPTSLFYNL AAGLVQPVFQ
RRQLQTQLEV SQIQRESALI QFRQSLTTAV TDVSNALVRN EKLQEQERIA TKRAQTVQGA
ITNAKLLFKS GMATYLEVIT AQSNALQAEL TLADIKRQRL GAMVDVYRSL GGGWR
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