Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0804 |
Symbol | |
ID | 8724535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 976866 |
End bp | 977693 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_003385666 |
Protein GI | 284035736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.808367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.36802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC TTACATTCCT GCTTTTTAGT CTTATCTCGT TCTGTTCCTT CGGACAAACG ACCGACACCC TTGTTTATAA CGCAAAACGG GCTGTTCCGC TCGAAGGAGC CAGTAACTTC CGCGACCTGG GCGGCTATCC AACCAAAAAT GGTCGTCGGG TAAAATGGGG GCATCTGTAT CGCTCGGCTG ATATTAGCAA ACTGACCGAT GCCGACTTAC AGGTTCTGGC TGATCTTCAC ATTACGGCTG TTTGCGACCT GCGCGGCCCG GATGAAATTA AGACTAACCC AGACCGGCTA CCAGCCGGAG CAACCTGGTA CAATATGCCG GCCGGGAGCG AAAATACCAG CGCCACAACG GCGGCTTTGA TGGGGGCCAA GCCCGCTAAC CGGGATTCGA TGATGATGGT CTTTTATGGC CGTACAGATC ACCTCAAAGC AAAATACAAG CCGATGTTCG ACCAATTGCT GGCCCTCAAT AACGATAAAG CGTTACTTTT TCATTGCACC GCTGGTAAAG ATCGGACAGG TATCGGTGCG GCTCTGATTC TATCAGCGTT GGGCGTTGAC CGGGCAATAA TTCTGAAAGA TTACGCAGCC ACTAATGAGT ACTGGAAAGG TAACAGAGAG CAGCTTGTGC AGGCTATGGC CAAACAGGGA ATGGACGAAA AGACCGTAAA AAGTATGCTG GCCGCAAACC CATCGTATTT ACAAACTACA TTCGACACCA TTGATCGGCA ATACGGTTCG ATGGATAAAT TCTTGGCTAA GGAACTGGAG TTGACACCTA AAAAACTGGC ATTGCTCCGG GCGAAATATA TTCAATAG
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Protein sequence | MQKLTFLLFS LISFCSFGQT TDTLVYNAKR AVPLEGASNF RDLGGYPTKN GRRVKWGHLY RSADISKLTD ADLQVLADLH ITAVCDLRGP DEIKTNPDRL PAGATWYNMP AGSENTSATT AALMGAKPAN RDSMMMVFYG RTDHLKAKYK PMFDQLLALN NDKALLFHCT AGKDRTGIGA ALILSALGVD RAIILKDYAA TNEYWKGNRE QLVQAMAKQG MDEKTVKSML AANPSYLQTT FDTIDRQYGS MDKFLAKELE LTPKKLALLR AKYIQ
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