Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0795 |
Symbol | |
ID | 8724525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 962069 |
End bp | 964804 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003385657 |
Protein GI | 284035727 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.403179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.168088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCC CAACGAGCGT ATCTTCCTCT GCTACCCCTT TGAACCTTTT CGCCAGCTTA GTAGACCATT CACCAAATGG AATAATTGTC TATGAACCAG TGCGCAACGA ATCAAATGTG ATTACGGATT ATCGGACGGT GTATTACAAT CAGAAGGCAA TACAAATCAC GGGGCATACG CATGAGGAAA TGATGACCCT GTGCCTATTT CAGCGGGCAC CTTACGCACG GGCACAGGAA GAAAGTTTTA GGCAGTTGGT AGAAGCGCAA ATTCCATTTG ATGTTGAGCA CGTCATTCCC GAAAGAAACC GATGGTTTTC GTTTGAAAAC CGTCAGTTGG ATAATGGTTT TTTTACAACC ATTCGCGACA TAGACGACCT TAAACGAGCG GAGCAGCAAC TGGAACAACA AAATAAAGTA CTAGAAGAAA CGATCAGCCG TACCAAAGAA CAGCAACTAC TGCTTAAAAG TGTGCTCGAC ACCTCGCCAA ACAGCATCAT GCTTGAGCGG GCGATTCGGG ATGAACAGGG TGCGATTATA GACTTTCAGG TCGTCCTGTT CAACCAGGCA GCGCTACGAC TGGGGTTCTA CTCATCAACG GAATTAGCAA AAAAACGGAT TAGTGAGCTG AATCCCAACT TCGTTTCATC GGGCCTGATG GCAGCTTATA GCAACGTTCT GGCAACAGGA CAGCCTTTTC AGACCGAAAT ATTCGCACCT CAGTTGCATA AACATCTGGC ACTGACGGTT ACCCGAATGG ATCGCGACCA AATCATTGTT TTGTTCGATG ATGTTACGCA GATCCGGGTT GATGCAAAAA CCTTACGAGA AAAGAACGAA CTACTGGACG GTGTACTACG TACATCATTA AGTTCGATCA TGGTTTACGA AGCGGTTCAT GATGTATCAG GGCAACTGGC TGACCTTCGG GTTGTATTGA CCAATGAAGC GTCGTTGCGG GCTTCTCACC GTAGAAATGA AAACATCATT GGCAAGCTGT TAACATCACT TAACCCCGAA ACCAGGACTA CCGGCCTTTG GGATCAATAC GTGGCTGTTT ACGAGTCGGG TGAAATTTTT CAGGGTAAAC ATTATTTCCC CACTTTAGAC AAGTGGTTTG ATGCAACAAT CAGCAAACTT GGTGATGGAC TGGTAACCAC CTTTAACGAC ATCACCCATG TATACTCTGT AAACCGGCAG ATAGAAGAGC AGGCACAGCT TTTTGACGGC GTGCTGAAAA ACATGACAAA TGGTCTATCC GTACTGGAGG CCATACGGGA TTCGGATGGT AATCCAATCG ACTTCCTATT TGTTCGGGTC AGTGAAGCTG TCTTACGAGA TACACGCCTT ACTAGCGAGC AATTAATCGG GAAGTCTCTA CTTTCCATTT TTCCCGGCGC TAAGCAAATG CCCCATTGGG ACGCCTTTAT TGATACGCTG TCGACCGGCG TACCGAAGCA CTTCGAATGG CTTTATACGT TGGCTGGGAC GAATACCTAT ACAGACAACT GGATCAATCG ACTCGACGAA AACAGGCTCG TTTCTGTATA TCTAATAACG AATGAACAGA AACAGGCAGA ATCGTTGGCA AAACAACGGG CATCTATCTT ACAAAGTGTT CTGGATAGTT GCCAAACCTC CATTGTCCTG TTTGAGGCTA TAAGAAACGA AGCCGGACAA ATTGTCGACT TTCGGTACCT GGTTCAAAAC GAAGCAAATG CCCGTCTGGT AAACCACCCT TTGGCTGAGA CTCAGTCGAG GACTATGCTT GAAGTACTCC CCTATTTAGT ACCATCCGGT ATTTTTGAAC GGTATGTTAC CGCCGTAGAA ACCGGCCAGC CTCAACGGTT CGAGCAGTAC TATAATGATG GTTCTGTAGA AGGCTGGTTC GACATCTCCG TTGTTAAACA GGATGACGGC ATAGTTGTCG TAGCGCATGA CAATACGCTT CTGCGCCGAA CGCTTAAACA CGCGGAACAA CTGGTGATCA ATCTACGCCA GTCGAACCAT AATCTGGAAC AGTTCGCCTA CATTGCCAGC CATGATTTAC AGGAACCCCT ACGCAAGATT CAATCATTCG GAAATCTGCT GATCGACCAA TACGGAAATT TGCTGCCGGA AGACGGGCGG GTAATGCTCC GGCGAATGCA ATCGGCAGCC GAGCGAATGA GTCAGCTAAT CCGGGATTTG CTCGCCTACT CCCGTTTAAG CAGTGAACAG GAGCCTTTTC AGCCGGTTAG CATGCAGCGA ATCTTGGCCG AAATTTTAAG TGACCTTGAA CTGGTTATTC AGGAGAAAAA GGCCCGTCTA ACCATCCCGA ACCAATCCGC TCACGCCTTG ATTTACATCA ACGGCAACCG AAGTCAGTTG CGGCAGTTGT TTCAGAACCT GCTGAGCAAC GCGCTCAAAT TCGTATCCCC AGACAGCACT CCGGAAGTGA CTTTTCAGGT ACGGACCGTT TCTTTCGAAG AAGTTCCTGC ACTGGTTCCA AACCGGGAAA AGTCGTCGTG GATTGCCGTC GATATTACCG ATAACGGTAT TGGCTTCGAT GAAAAATACC AGGAGCAAAT CTTTCATCTA TTCGAACGTC TGCACGGCCG GAATGACTAC TCAGGTACGG GTATCGGGCT GGCGATCTGC CGAAAAGTGG CCGAAAATCA TGGCGGTACC ATTGTCGCGA AAAGCCAAAA GGGAGCTGGC TCTACGTTTA CGGTATTTTT GCCAACGGTC GATTAA
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Protein sequence | MTTPTSVSSS ATPLNLFASL VDHSPNGIIV YEPVRNESNV ITDYRTVYYN QKAIQITGHT HEEMMTLCLF QRAPYARAQE ESFRQLVEAQ IPFDVEHVIP ERNRWFSFEN RQLDNGFFTT IRDIDDLKRA EQQLEQQNKV LEETISRTKE QQLLLKSVLD TSPNSIMLER AIRDEQGAII DFQVVLFNQA ALRLGFYSST ELAKKRISEL NPNFVSSGLM AAYSNVLATG QPFQTEIFAP QLHKHLALTV TRMDRDQIIV LFDDVTQIRV DAKTLREKNE LLDGVLRTSL SSIMVYEAVH DVSGQLADLR VVLTNEASLR ASHRRNENII GKLLTSLNPE TRTTGLWDQY VAVYESGEIF QGKHYFPTLD KWFDATISKL GDGLVTTFND ITHVYSVNRQ IEEQAQLFDG VLKNMTNGLS VLEAIRDSDG NPIDFLFVRV SEAVLRDTRL TSEQLIGKSL LSIFPGAKQM PHWDAFIDTL STGVPKHFEW LYTLAGTNTY TDNWINRLDE NRLVSVYLIT NEQKQAESLA KQRASILQSV LDSCQTSIVL FEAIRNEAGQ IVDFRYLVQN EANARLVNHP LAETQSRTML EVLPYLVPSG IFERYVTAVE TGQPQRFEQY YNDGSVEGWF DISVVKQDDG IVVVAHDNTL LRRTLKHAEQ LVINLRQSNH NLEQFAYIAS HDLQEPLRKI QSFGNLLIDQ YGNLLPEDGR VMLRRMQSAA ERMSQLIRDL LAYSRLSSEQ EPFQPVSMQR ILAEILSDLE LVIQEKKARL TIPNQSAHAL IYINGNRSQL RQLFQNLLSN ALKFVSPDST PEVTFQVRTV SFEEVPALVP NREKSSWIAV DITDNGIGFD EKYQEQIFHL FERLHGRNDY SGTGIGLAIC RKVAENHGGT IVAKSQKGAG STFTVFLPTV D
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