| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0785 |
|---|
| Symbol | |
|---|
| ID | 8724515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 952054 |
|---|
| End bp | 952812 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003385647 |
|---|
| Protein GI | 284035717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATT TTATTGAGTT ATCGTATCGG GGAACGGCTT ATCATGGCTG GCAAACACAG
GCCAACGGCA TAAGCATTCA AATTACGCTG GAAGCGGCCT TGAGCCAACG GCTAGGTAAA
CCCGTTTACA TCATGGGCAG TGGCCGAACA GACGCCGGTG TGCATGCCAA ACAGCAGTTT
GCTCATTTTG ACAGTGAGGA GCCACTGGAT ATAACCGAAA GTCTTATCTA TTCGCTCAAT
TGTATGTTGC CAGAGGATAT CGCCATTCAC GCCATATTTC CGGTTTCGGA CAAAACCCAT
GCTCGTTTTT CGGCAATTTC CCGGTATTAC CAATACCACA TCACCCGTCA GAAAGATGCC
TTTCAGGGCA CTCTCACCTA TCATTTTCGG CCGCAGTTGA ACGTCGATCG GATGAATGAA
GCCTGTACGT TGCTGCTCCG GCATACTAAC TTTCAGAGTT TCAGTAAAGC CAGGGCCAAT
GTGACTCACT TTCACTGTCA ACTTGAGTTT GCTTATTGGC GTTATACAAA TGTCGATTGT
CTGACGTTTC ATATTAAAGC GAATCGATTT CTGTGGGGTA TGGTGCGGAC CATTGTGGGC
ACTATGCTCG AAATAGGGCA GGAGCGGATG AGCCTTGAGC AGTTTGAGAA AATCATTTTG
GCCCGGGACC GTAAAATAGC GGGCCGGGCC GCACCGGCAA ACGGCTTGTA TCTGGTGGAA
GTCGGCTATC CGGCTGAGGT GTTTCGGGAG CGGACGTAG
|
|---|
| Protein sequence | MRYFIELSYR GTAYHGWQTQ ANGISIQITL EAALSQRLGK PVYIMGSGRT DAGVHAKQQF
AHFDSEEPLD ITESLIYSLN CMLPEDIAIH AIFPVSDKTH ARFSAISRYY QYHITRQKDA
FQGTLTYHFR PQLNVDRMNE ACTLLLRHTN FQSFSKARAN VTHFHCQLEF AYWRYTNVDC
LTFHIKANRF LWGMVRTIVG TMLEIGQERM SLEQFEKIIL ARDRKIAGRA APANGLYLVE
VGYPAEVFRE RT
|
|---|
| |