Gene Slin_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0777 
Symbol 
ID8724507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp942089 
End bp942676 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content33% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003385639 
Protein GI284035709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.738821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA CATTGTTTTA TCAACTGTTG TTAGGTTTAC TCTTAGCGCT AAGCACTATA 
GAGAATTTAG CACTAGGACA GCAAAAAAAG CCAACCATTG TTTTTGTTGA CCCTAATATA
TCAATCCAAA AGTGGATTGG AAAAAAAATG CCAATATTTA GACTTCAGGA TAAACAAGGT
AATGTTTATG ATAATAAGTC TATTTTAGGA AAAGTGACTG TCTTTAATTT GTGGTCTATT
CATTGTCATC CGTGTATAGT TGAATTTCCT ATGCTGAACG GTTTAGTTGG TAAGTATTCT
AAAGATAATA TTATTTTTTT AGCTCCAGCG CCTGAGTCAA GCGAACAGAT AAATAATGCG
ATTAGTGTGG ATAGTTTTAA TTATACAGTT TTACCTGATG CCCAATCATT TTTTGATATA
ATGGGATTGG TTGGTTATCC TTATCATATC CTTGTAGATC GTAACGGTTT TATTCGATAT
ATTCATATGG GAATCAAGAA TCGAAAATCT GGAAAGGAAA TAGCAATAAC CGAGCTTCCA
CAAGTTATAG AGCATGAATT AAACGAGAAG GAGGCTGAGC AGAAATAG
 
Protein sequence
MRITLFYQLL LGLLLALSTI ENLALGQQKK PTIVFVDPNI SIQKWIGKKM PIFRLQDKQG 
NVYDNKSILG KVTVFNLWSI HCHPCIVEFP MLNGLVGKYS KDNIIFLAPA PESSEQINNA
ISVDSFNYTV LPDAQSFFDI MGLVGYPYHI LVDRNGFIRY IHMGIKNRKS GKEIAITELP
QVIEHELNEK EAEQK