Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0770 |
Symbol | |
ID | 8724500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 935616 |
End bp | 936932 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Chorismate binding-like protein |
Protein accession | YP_003385632 |
Protein GI | 284035702 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.324885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCTG ATTATTTTAG TACAGCTTCA TCAACTACTG AATCATACAC TCGAACCAGC AAACCCAGCG CCGGTCAGCT CTGGGAAACG GCTCATCAGC TCGGTTTTCC GGCAGCCCTC TGGCGATTGC CCAATAAGCG CGACAAGCAC CTGATCGTCT CTTTCGATGA GGTACTGCCG CGCGTATCGG CGGATCTAGA CGAATTACCG GCTGGCTTTC TGATTAGCCC TTTCGATAAT CTGGCCAGCA CCGCCCCCAC CAACATGTCA TCCGGGGCAA CAACGGGTAC TAGCATCAGC ACACAATCGC TTTTTTTACG GGCCGACCTC CAGGCTTCCT TTTCAGAACG GGCTGGTAAA AGCGATGTCA GTATTACAGC AAATGCCCCG GCCGACACGT TTCGGCAGGC TTTGCGTGAG CAGATGACAA ACAAGACGCC TGAAAAAACT CCGCAGACGG TCACTCCACT CTCCGATCTG GAAGCCCAGG CTACTTATGT ACGAAATGTA GGCCTGGCCG TAGAAGCCAT GCAGCGGGGT GAGTTTCGGA AAGTGGTGCT ATCAAGAACG AAGCAGGTAC AGTTTGCTGA TGCGCCCAAC GCCGTCGCTT TATTCGACAA GCTCTGCACG GCTTATCCAA CCGCATTTAT ATCGGCCGTG TCGATTCCCG AAAGAGGACA GATATGGGTC AGTGCCACGC CCGAACGGCT CGTTAGTGTC GATGCTGCTG GCTTGTTCAG AACGGCATCA CTCGCAGGAA CGCAATCGGC TTTTGAGGCA GATGGAACGC CCAAGCGGCC TGCCGAAGCC ATGTGGTCGC AGAAAGAGAT TGAAGAGCAG GCCCTGGTGA GCCGCTATAT CATCGAGTGC TTTAAAAAGA TACGCTTGCG CGAATACCTA GAAGAAGGCC CGAAAACGGT TATTGCCGGT AATTTGATGC ATTTAAGCAC CTATTTTACC GTGGATACGC AAGCTGTTCG GTACCCGCAG CTGGGAACGG TGATGCTCCG TCTGCTGCAC CCCACCTCCG CCGTTTGTGG CATGCCACGC GATGCCGCTT TTAACTTTAT CAGCCAGTAC GAAACACACG ACCGGGAGTT CTACAGCGGT TTTCTGGGAC CGGTTAATGT CAGCGTAGAT AATGAAGGAG CTGAAAGTGA CCTGTTCGTT CATATCCGTT GTATGAAGCT GGAAGGGAAC AAGGCCACTC TTTATGCCGG TGCAGGCCTC ACGGAGGACT CTGTACCCGA GCGGGAATGG GTTGAAACAG AAATGAAATG TCAGACCCTC TTACAGGTAC TGATGAATGA TAAATGA
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Protein sequence | MQSDYFSTAS STTESYTRTS KPSAGQLWET AHQLGFPAAL WRLPNKRDKH LIVSFDEVLP RVSADLDELP AGFLISPFDN LASTAPTNMS SGATTGTSIS TQSLFLRADL QASFSERAGK SDVSITANAP ADTFRQALRE QMTNKTPEKT PQTVTPLSDL EAQATYVRNV GLAVEAMQRG EFRKVVLSRT KQVQFADAPN AVALFDKLCT AYPTAFISAV SIPERGQIWV SATPERLVSV DAAGLFRTAS LAGTQSAFEA DGTPKRPAEA MWSQKEIEEQ ALVSRYIIEC FKKIRLREYL EEGPKTVIAG NLMHLSTYFT VDTQAVRYPQ LGTVMLRLLH PTSAVCGMPR DAAFNFISQY ETHDREFYSG FLGPVNVSVD NEGAESDLFV HIRCMKLEGN KATLYAGAGL TEDSVPEREW VETEMKCQTL LQVLMNDK
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