Gene Slin_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0770 
Symbol 
ID8724500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp935616 
End bp936932 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID 
ProductChorismate binding-like protein 
Protein accessionYP_003385632 
Protein GI284035702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.324885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTG ATTATTTTAG TACAGCTTCA TCAACTACTG AATCATACAC TCGAACCAGC 
AAACCCAGCG CCGGTCAGCT CTGGGAAACG GCTCATCAGC TCGGTTTTCC GGCAGCCCTC
TGGCGATTGC CCAATAAGCG CGACAAGCAC CTGATCGTCT CTTTCGATGA GGTACTGCCG
CGCGTATCGG CGGATCTAGA CGAATTACCG GCTGGCTTTC TGATTAGCCC TTTCGATAAT
CTGGCCAGCA CCGCCCCCAC CAACATGTCA TCCGGGGCAA CAACGGGTAC TAGCATCAGC
ACACAATCGC TTTTTTTACG GGCCGACCTC CAGGCTTCCT TTTCAGAACG GGCTGGTAAA
AGCGATGTCA GTATTACAGC AAATGCCCCG GCCGACACGT TTCGGCAGGC TTTGCGTGAG
CAGATGACAA ACAAGACGCC TGAAAAAACT CCGCAGACGG TCACTCCACT CTCCGATCTG
GAAGCCCAGG CTACTTATGT ACGAAATGTA GGCCTGGCCG TAGAAGCCAT GCAGCGGGGT
GAGTTTCGGA AAGTGGTGCT ATCAAGAACG AAGCAGGTAC AGTTTGCTGA TGCGCCCAAC
GCCGTCGCTT TATTCGACAA GCTCTGCACG GCTTATCCAA CCGCATTTAT ATCGGCCGTG
TCGATTCCCG AAAGAGGACA GATATGGGTC AGTGCCACGC CCGAACGGCT CGTTAGTGTC
GATGCTGCTG GCTTGTTCAG AACGGCATCA CTCGCAGGAA CGCAATCGGC TTTTGAGGCA
GATGGAACGC CCAAGCGGCC TGCCGAAGCC ATGTGGTCGC AGAAAGAGAT TGAAGAGCAG
GCCCTGGTGA GCCGCTATAT CATCGAGTGC TTTAAAAAGA TACGCTTGCG CGAATACCTA
GAAGAAGGCC CGAAAACGGT TATTGCCGGT AATTTGATGC ATTTAAGCAC CTATTTTACC
GTGGATACGC AAGCTGTTCG GTACCCGCAG CTGGGAACGG TGATGCTCCG TCTGCTGCAC
CCCACCTCCG CCGTTTGTGG CATGCCACGC GATGCCGCTT TTAACTTTAT CAGCCAGTAC
GAAACACACG ACCGGGAGTT CTACAGCGGT TTTCTGGGAC CGGTTAATGT CAGCGTAGAT
AATGAAGGAG CTGAAAGTGA CCTGTTCGTT CATATCCGTT GTATGAAGCT GGAAGGGAAC
AAGGCCACTC TTTATGCCGG TGCAGGCCTC ACGGAGGACT CTGTACCCGA GCGGGAATGG
GTTGAAACAG AAATGAAATG TCAGACCCTC TTACAGGTAC TGATGAATGA TAAATGA
 
Protein sequence
MQSDYFSTAS STTESYTRTS KPSAGQLWET AHQLGFPAAL WRLPNKRDKH LIVSFDEVLP 
RVSADLDELP AGFLISPFDN LASTAPTNMS SGATTGTSIS TQSLFLRADL QASFSERAGK
SDVSITANAP ADTFRQALRE QMTNKTPEKT PQTVTPLSDL EAQATYVRNV GLAVEAMQRG
EFRKVVLSRT KQVQFADAPN AVALFDKLCT AYPTAFISAV SIPERGQIWV SATPERLVSV
DAAGLFRTAS LAGTQSAFEA DGTPKRPAEA MWSQKEIEEQ ALVSRYIIEC FKKIRLREYL
EEGPKTVIAG NLMHLSTYFT VDTQAVRYPQ LGTVMLRLLH PTSAVCGMPR DAAFNFISQY
ETHDREFYSG FLGPVNVSVD NEGAESDLFV HIRCMKLEGN KATLYAGAGL TEDSVPEREW
VETEMKCQTL LQVLMNDK