| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0735 |
|---|
| Symbol | |
|---|
| ID | 8724465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 889963 |
|---|
| End bp | 890901 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003385597 |
|---|
| Protein GI | 284035667 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTA CACGACGCCG TTTTCTCACC ACCGCCACCG CTTTGGCCGG GGCTACGCTG
CTTCCCGACA GCCAACCGGC TCAGGCAAAA CCAGTAGCAA AGTCGTTTCC CATTGCCTGT
AATTCATACA CCTGGCTTAC TTTTTACCAG CGGCAGGGCA AAACCTGGAT GGCCGACCCC
GATGCGTCGC TGGCAGAATT CGCGCAGTCT GGCATAACGG CTTACGAGCC AGCAGTTAAT
TCGGCAGCAG ACGTAACGAA ACTCTTCCCC TTGCTGACAA AGCATAAGCT GGCGATGCAC
TCGCTCTACG TGAACAGCAC GCTCCACGAG GCACACGAAG CGCAGAAATC CATCGACTCC
GTTCTGGAAA TTGCGGATGC CGCCCGTCCC GCCGGAACGT CGATCTTCGT TACCAATCCC
AGCCCTATAA AATGGGGTAC GAACGACGAC AAAACCGATG CTGATTTAAC CGAGCAAGCC
CGCAACCTCG ACCGGCTCGG TGCCGAACTC CGAAAACGTG GCATTACGCT GGCCTACCAT
ACCCACGCCC CCGAGCACCG GCAGGCCGCC CGCGAGTTTC ATCACATGCT GTTGGCCACC
GACCCCAAAA ATGTGTCCCT TTGCCTGGAT GCTCACTGGG TGTACCGGGG GTCTGGGAAT
TCGCAGGTGG CCTTGTTCGA CGTAGTCAAA CTATACGGCA AGCGGGTCGT TGAAGTTCAC
ATCCGACAGT CGAAGAACGG CATCTGGCAG GAAACGTTTG GGGAGGGAGA TATTGATTAC
AAACGACTGG CTACCGAATT GAAAGCCCAT AATGTTCGTC CGAATCTGGT ACTGGAACAA
TGTCTGGAGA AGGGGTCGCC CGATACGATG AGCGCCGTGG ACGCCCACAA GCAGGATTTG
GCTATGGTAA AAACCTTGTT TGCCGGGTTG CTAGGATAG
|
|---|
| Protein sequence | MSSTRRRFLT TATALAGATL LPDSQPAQAK PVAKSFPIAC NSYTWLTFYQ RQGKTWMADP
DASLAEFAQS GITAYEPAVN SAADVTKLFP LLTKHKLAMH SLYVNSTLHE AHEAQKSIDS
VLEIADAARP AGTSIFVTNP SPIKWGTNDD KTDADLTEQA RNLDRLGAEL RKRGITLAYH
THAPEHRQAA REFHHMLLAT DPKNVSLCLD AHWVYRGSGN SQVALFDVVK LYGKRVVEVH
IRQSKNGIWQ ETFGEGDIDY KRLATELKAH NVRPNLVLEQ CLEKGSPDTM SAVDAHKQDL
AMVKTLFAGL LG
|
|---|
| |