Gene Slin_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0731 
Symbol 
ID8724461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp885916 
End bp887283 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content56% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003385593 
Protein GI284035663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC GCAATCGACT GACGAGCCTG TTCACCGCCA TTGTATCCGG CCTTTTGCTG 
CTGTTTTGCG GGGTTATCTA CCTCGTTGCC GAACGCCACC GGCAATACGA GTTTCGCGAG
CGGCTGGAAG CTGAAGCCGT TACTTCAGCC GAACTCCTAT TCGGCCCCGA CACCACCGGT
CGGCAGTTAT ATAAGCTACT GGATAAGAAC CATATGACGG TGCTGGATGA AGAAGAGATC
ATCATCTACG ACTACCGAAA CCGGATCGTC TATGAAAGCG GAACCGATTA CCTTACGGTC
TCCAAAAGTC AACTCGATCA GGTGCGGCTG GCGGGTCGGT TATACTGGCG TGTTGGCTTG
CGTGAAATTA TAGGTGTACG GTACACGCAG CATAATAACC GGCTGGTCGT CCTGGCCTCG
GGGGTCGATA AGTATGGTTT TAGTAAACAG CGTGCACTGG CCCTGCTGCT GTCGATCGGC
TGGGGACTCG CCGTACTGAT TGTTTTTGGC AGCGGGCTTG TCTACGCGGG TCGGGCACTA
CGGCCTATCC GGCGAATCAT CCGGCAGATC GACACGATCA CAGCCTCCAA ACTGGAAAGA
CGGCTGGCCG AAAGCACCGA TGCCGATGAG TTGACCCAAT TGGCCCAGCG CTTCAATCGT
ATGCTCGACC GGCTTGAAGA AGCCTTTCGC CAGCAACGAA CCTTCGTTTC TCACGCATCG
CATGAGTTAC GGACTCCATT AACCGCCATT ACGGGTCAGC TTGAAGTAGC CTTGCTGGCG
GGAGATGATC TGGACGAGCT GCGGGCTACG GTCCAGTCGG TGCTGGAAGA CGTGCGGGAC
CTGAACCGTC TGACCAACGG CTTACTGAGC CTGGCCAACG TCAGCGTGGA TGAATCGGCC
GTAGCCGTTG GGGCCGTACC CCTCGACGAA CTGGTCTGGC AAGTGCGAGC AGACCTGCTG
CGACTCCGGC CCGACTATAC AGTAGCGGTT ACATTCGGGG AGTTACCTAA CCAGCAAACC
GCCCTGCTGG TAACGGGCAG CGAATCGTTG TTGCGCACGG CGCTGTTTAA CCTGATGGAA
AATGGCGGCA AGTTCTCCCC CGACCATCGC GTGAGCGTCC GGCTGGCCAT CGAATCGGAC
ACGATTGCCT TGACATTTCA CAACCAGGGG CCGCCCATTC CGGCTGAGGA ATTACCCGAA
ATTTTTAAAC CCTTCCAACG GGGTACCAAC GGTCGAACAG TAGCTGGTCA TGGTATTGGT
TTATCACTTA CGCAGCGGAT TGTTCAACTG CACCGGGGTC GACTGACGGT TACCTCCAAT
GCAGCTCAGG GTACCTTTTT CCGGCTCGAC CTCCCCCGAT CTGCTTAA
 
Protein sequence
MTLRNRLTSL FTAIVSGLLL LFCGVIYLVA ERHRQYEFRE RLEAEAVTSA ELLFGPDTTG 
RQLYKLLDKN HMTVLDEEEI IIYDYRNRIV YESGTDYLTV SKSQLDQVRL AGRLYWRVGL
REIIGVRYTQ HNNRLVVLAS GVDKYGFSKQ RALALLLSIG WGLAVLIVFG SGLVYAGRAL
RPIRRIIRQI DTITASKLER RLAESTDADE LTQLAQRFNR MLDRLEEAFR QQRTFVSHAS
HELRTPLTAI TGQLEVALLA GDDLDELRAT VQSVLEDVRD LNRLTNGLLS LANVSVDESA
VAVGAVPLDE LVWQVRADLL RLRPDYTVAV TFGELPNQQT ALLVTGSESL LRTALFNLME
NGGKFSPDHR VSVRLAIESD TIALTFHNQG PPIPAEELPE IFKPFQRGTN GRTVAGHGIG
LSLTQRIVQL HRGRLTVTSN AAQGTFFRLD LPRSA