Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0726 |
Symbol | |
ID | 8724456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 881021 |
End bp | 883372 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | capsular exopolysaccharide family |
Protein accession | YP_003385588 |
Protein GI | 284035658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA ACTCATCGAA CTACAGCTAC GTGCCATACC AGCTCATGGA CACGGGCAGC ACCCAAATCA GAGCAACGCT GTTGCGGTAT GTCCGTTACT GGTACTGGTT TGTGCTATCG GTAGGGACAT TACTTATCGT CGCTTTTTTT TACCTGCTCT ACCAGCAGCC TATCTACAAA AGCACGGCAA GTTTACTGGT TAAGGACGAA AAAAAAGGAC TGGACTCCGA GAGCATGCTC AAAGAGCTGG AAATTTTTGC CCCGAAAAAA GTAGTCGAGA ATGAAATTGA AGTGCTGAAG TCCTACACCC TGATGGCTCG GGTGGTTCAA CAACTCCATC TGGACGTAGT CTATTATCGC GAAACGCCAT TTGGTAAACG GGAGCTATTT AACCAGTCGC CGGTGCGTTT GATCATTGAG CAAGCCAACC CGTCACTCTA CACGGCAGAC CCGCTACACC TGGCCTTTAT CGACAAAAAT ACCGTCAGCC TAAACGGTCA GCGATATCCC CTCAACCAGA GCGTAAAGAC GCCTTACGGC CGGTTACGGG TGTTTCCCCG CCAGCCGGTT TCATCATCGA CCGAGCCCGT TTTCATTCAG GTTTTCGAGG AGGAAAAAAT AGTCAATGGC TATTTGAAAG TACTGAAGGC CGAGCCTACC AGCAAAGCCT CTACGGTAAT AGCCCTTTCA CTGGAAACAG CCGTTCAGGA TAAAGGAGAA GCTATTCTGA ATCGCCTGAT CGATGTTTAT AACGAAGCCG CCGTACTGGA TAAAAACCGC GTTGCGTCGA ACACCCTGAA TTTTATCGAA GAACGGCTGC AACTGGTAGC GGGCGAGCTG GAATCGGTCG AAAAAGGCGT TGAACGATAC AAATCGGCGC AGGGAATTAC CGACCTTACC AGCCAGGCGC AGGGCTTTCT GGAAACCGTT CAGCGCAATG ATGCCGAGAT GAGTCAGGTT TCTATTCAGT TGGGAGCCCT CCGTGAAATT GAGGAGTATA TTCACCAGCA ACCCGGTCAT CGGAATGGTA CACCTGCAAC CCTTGGCTTA AGTGACCCCA CCCTGATCAA CCTCATTCAA ACCGCTACCA AGTTAGAAGC ACAACGGAAT GAACTGGCAC AGACAGTTCC GGATAAAAAT CCACTCCTGC GCACTGTCGA TGCCCAAATC AGAGCCATTA AAGCCGACAT CAATGAGAAT ATAGGCACCA TGCGGGCTAT GCTCACCACA GCCCAGCGCC AGTTTACCCG GACTAACCAG ACGATAGAAG GGACAATACG AACAATACCG GCCAAAGAGC GGGCGCTGCT GAACATTACC CGCCAGCAGG CCATCAAAAA TGATTTGTAT ACCTATTTGC TGCGCAAACG GGAAGAAACG GCGGTATCCT TTGCTTCGAC TATTTCCGAC TCCCGGGTAA TCGACGTAGC CCGTAGTGAA GCAAAACCAA CGAAACCGAA CAAGCCGCTC ACTTACCTGC TGTTTATGCT TGTTGGTTTG ATGATCCCTA TTGGCATCAT GAGTAGTCGT GATGTCATTA ACAACCGGGT AATCCGGCGA GCCGATGTAG AAGCCCAGAC CCAAACGCCC ATTTTAGGCG AAATTGTACG AAAACGCTCA CCCGACTCAC TTGTCGTATC CTCGCGGGTA AACTCGGTCA TTGCCGAACA GATCAGGGCC CTGCGTACCA ACCTGAGCTT CCTGCGCGAT CACCGAGCGG GTAGTCAGGT GTTACTTTTC ACGTCCAGCA TCAACGGCGA AGGGAAATCG TTTCTCTCCC TGAACCTCGG AGCTAGTCTG GCTCTGGTGG GGTCACGAAC CGTAATTCTG GAGATGGACT TGCGAAAACC TCAACTTCGC AACTCACTCG ACATCGACAA TGGGCTGGGA CTGAGCAACT ATTTGATTGG CGAAACAACC GTAGAGGCTA TTATCCAACC AATTATAGGC AATGACAATT ATTACATCGT TCGAAGCGGC CCACTGCCCC CCAATCCGTC TGAGTTACTG AGTGGAGTTC GGCTGGAGAA ACTGATTCGT GAATTGCGGG AACGCTTTAA CTATGTGATC ATCGATGCAC CACCCGTTGG TCTGGTTACC GATGCCCAGC TCATTGCCCC GTATGCCGAT GCTACCTTAT ACATCGTTCG GCACGATGTT ACGCCCCGGA ATTATTTGAA AATGATTGAA ATGCTTCACC GCGAAAAGCG CTTCAACAAA CTCAACATTG TACTCAATGA CGTTGGTGAC AGTGAACCGA ATTACTACAG CTATGGCCAG AAAGGAAATG CCTACGGCTA CACAAACACC AAGAAAAAAA CGCTGCTAGA CCGCTTACTT TCTACTACTT AA
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Protein sequence | MATNSSNYSY VPYQLMDTGS TQIRATLLRY VRYWYWFVLS VGTLLIVAFF YLLYQQPIYK STASLLVKDE KKGLDSESML KELEIFAPKK VVENEIEVLK SYTLMARVVQ QLHLDVVYYR ETPFGKRELF NQSPVRLIIE QANPSLYTAD PLHLAFIDKN TVSLNGQRYP LNQSVKTPYG RLRVFPRQPV SSSTEPVFIQ VFEEEKIVNG YLKVLKAEPT SKASTVIALS LETAVQDKGE AILNRLIDVY NEAAVLDKNR VASNTLNFIE ERLQLVAGEL ESVEKGVERY KSAQGITDLT SQAQGFLETV QRNDAEMSQV SIQLGALREI EEYIHQQPGH RNGTPATLGL SDPTLINLIQ TATKLEAQRN ELAQTVPDKN PLLRTVDAQI RAIKADINEN IGTMRAMLTT AQRQFTRTNQ TIEGTIRTIP AKERALLNIT RQQAIKNDLY TYLLRKREET AVSFASTISD SRVIDVARSE AKPTKPNKPL TYLLFMLVGL MIPIGIMSSR DVINNRVIRR ADVEAQTQTP ILGEIVRKRS PDSLVVSSRV NSVIAEQIRA LRTNLSFLRD HRAGSQVLLF TSSINGEGKS FLSLNLGASL ALVGSRTVIL EMDLRKPQLR NSLDIDNGLG LSNYLIGETT VEAIIQPIIG NDNYYIVRSG PLPPNPSELL SGVRLEKLIR ELRERFNYVI IDAPPVGLVT DAQLIAPYAD ATLYIVRHDV TPRNYLKMIE MLHREKRFNK LNIVLNDVGD SEPNYYSYGQ KGNAYGYTNT KKKTLLDRLL STT
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