| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0723 |
|---|
| Symbol | |
|---|
| ID | 8724453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 878360 |
|---|
| End bp | 879001 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_003385585 |
|---|
| Protein GI | 284035655 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTTA AGCTCATACG TTTCGGTTTC AGAGTCATTC GATTTGGATG GCGACGCAGT
CGGCGGGTTG CCGGGGCACT GGTTACCCGT ATGCTCTTTT ACCTGAACAA CGTTCCGTAC
GGTTCGGGCC TGGAAAGCTA CGGCATACCA ATCGTCGACA TCAACGACGG CTGCTCCATG
ACGATCGGCA AGTCATTTAG CATCAACAGT GGTCGAAATT ATAATCGAAT CGGCCGACAA
CAGCCCTGTT TTTTCATTGC TGACCTGGGG GGAGCCATTC AAATTGGCAA CCGTGTAGGG
ATGAGTTGCA CGGCGCTGGT TTGCCATAAT GCCATTACGA TTGGCGACGA TGTTACGATT
GGGGGTAACA CCGTTATTTA CGACACGGAT TTTCATTCGT TGGAACCTGC TCAGCGAGTC
CGCTTCCGGG ATAACGCATT GGCCAAAACG GCTCCGGTCG TTATACAAAA TGGCGTCTTT
ATCGGTGCGC ATGTTACCAT TTTAAAAGGT GTGACCATCG GTGCGCATTC CGTTATTGCG
GCCGGTTCAG TCGTTACCGG AACCATTCCG CCCAACCAGA TATGGGGAGG CAATCCCGCC
CAATTTATTC GTTCACTCCA GGCTCAACCT GTTTATGAGT AA
|
|---|
| Protein sequence | MPFKLIRFGF RVIRFGWRRS RRVAGALVTR MLFYLNNVPY GSGLESYGIP IVDINDGCSM
TIGKSFSINS GRNYNRIGRQ QPCFFIADLG GAIQIGNRVG MSCTALVCHN AITIGDDVTI
GGNTVIYDTD FHSLEPAQRV RFRDNALAKT APVVIQNGVF IGAHVTILKG VTIGAHSVIA
AGSVVTGTIP PNQIWGGNPA QFIRSLQAQP VYE
|
|---|
| |