Gene Slin_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0720 
Symbol 
ID8724450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp875406 
End bp876092 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content46% 
IMG OID 
ProductAcetyltransferase (isoleucine patch superfamily)- like protein 
Protein accessionYP_003385582 
Protein GI284035652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.490723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA AACTTAAGTC AATTGTGAAG CGCAATAAAG TATTACACAC CTTTGCGCAA 
ATTCTGCTGG CAGTGAAAGC AAAATTGGCC TTACCTATAC GGGGACGGGG CAACCGAATT
ATCAATAAAG GCGTGTTTCT TCAGGTTAGG ATCGATATTA ATGGCAACAA CAACATCGTT
GATATTGCGG AGGGGGCTTT CTTAACGAAC ATGACGATTT ATATCAGAGG GAATAATAAT
CTTCTGCGGA TCGGTGCCTA CTGCAAGGTC AAAGGGGGAT GTGTGTGGTT TGAAGACGAC
AACGGTCAGG TCATTATAGG CGATCACACC AGTATTGAAT CGGCGCACTT AGCCGTTACT
GAACCTGGCA AACGCATCAC CATCGGCGAG GATTGTATGC TCTCGGCAGG GATCGACATT
CGGACTGGCG ACTCCCATAG CATTTTAGAC ACCGAAACGG GGAAGCGAAT CAACTACGCC
CAGGATGTCA CAATTGGCAA TCATGTCTGG ATTGGCCTGA ATGCCGTCCT TCTGAAAGGC
GTTTCGATTG GCAACAACTC CATAATTAGT ACCAACGCCG TTGTCACTCA AGCGATTCCA
GACCATTCGA TAGCTGCGGG CGTACCGGCA AAAATTATAA AAAGTAACGT AGACTGGTTG
CGGGAACGTA CTTATGAGAC TGAATAA
 
Protein sequence
MNQKLKSIVK RNKVLHTFAQ ILLAVKAKLA LPIRGRGNRI INKGVFLQVR IDINGNNNIV 
DIAEGAFLTN MTIYIRGNNN LLRIGAYCKV KGGCVWFEDD NGQVIIGDHT SIESAHLAVT
EPGKRITIGE DCMLSAGIDI RTGDSHSILD TETGKRINYA QDVTIGNHVW IGLNAVLLKG
VSIGNNSIIS TNAVVTQAIP DHSIAAGVPA KIIKSNVDWL RERTYETE