Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0717 |
Symbol | |
ID | 8724447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 872337 |
End bp | 873167 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | glycosyl transferase, WecB/TagA/CpsF family |
Protein accession | YP_003385579 |
Protein GI | 284035649 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.199258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAAGA CGATACATCA GGTGCCGGTA CTGCCACCTG CTACAGGCCA GCACGATGAA CTCAAGCAAT CACCAGAGCG TAAGGTTGCC ATTAGTTTAG GATTAACTAG TCTTTCATAC AACGCCTTTA TTCAAACGGT GATTAGCGCG GCCCGTCAGC GTAAATCTGC GTATGGCTGC TTTGCTAATG TCCATATGGT GGTAGAGGCC GTTAAAGATG CCAATTTTGC TAATGCGGTT AATAGTAGTA CCTGGGTGAC TCCAGATGGC GTACCGCTGC TTTGGACACT TCGGGCTTTC TATGGGCTTC GGCAGGACCG TATAACGGGT CTTGATGTAT TGCCTGCATT ACTTGAAGAA GCTGCCCGCA ATCAACTCTC CGTTTATTTC TACGGGTCTA CTCCGTCAAT TTTAGAACAA TGTCGCGTTT TCTGCGCCGA GCGTCACCCA ACACTGACTA TAGCTGGCAT GTATTCCCCT CCGTTTCGAG CCCTATCTCG CGAAGAGGAG GAGCAAGCGA TAGCTAACAT AAATGCATCG GGTGCTTCTA TTGTATTTGT CTCGCTGGGT TGTCCCAAAC AGGAAAAATG GATGGCGGCT GTCTCGCAGC AGATATCAGC AGTGCTACTG GGTATTGGCG GAGCCTTACC CGTATTGGTT GGGGCTCAGA AACGAGCCCC CAGGTGGATG CAGCGCAGCG GATTGGAATG GTTTTATCGG CTGGTTCAGG AGCCGCGCCG GTTAATTAGT CGGTATGTGA CAACAAATAG TTTGTTTGTG TACTATTTTT TAAAAGGCTT CTATTATCAC CGTGTACGGC ATCAAGTTTG A
|
Protein sequence | MFKTIHQVPV LPPATGQHDE LKQSPERKVA ISLGLTSLSY NAFIQTVISA ARQRKSAYGC FANVHMVVEA VKDANFANAV NSSTWVTPDG VPLLWTLRAF YGLRQDRITG LDVLPALLEE AARNQLSVYF YGSTPSILEQ CRVFCAERHP TLTIAGMYSP PFRALSREEE EQAIANINAS GASIVFVSLG CPKQEKWMAA VSQQISAVLL GIGGALPVLV GAQKRAPRWM QRSGLEWFYR LVQEPRRLIS RYVTTNSLFV YYFLKGFYYH RVRHQV
|
| |