Gene Slin_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0707 
Symbol 
ID8724437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp861800 
End bp862564 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content44% 
IMG OID 
ProductPhosphosulfolactate synthase 
Protein accessionYP_003385569 
Protein GI284035639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.277152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.719219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA CGCTTACGCA AATACCCGAA CGCACTCTAA AACCCCGTCA AAGTGGATTG 
ACAATGGTTA TGGATAAAGG GTTAAGCCTT CGGGAAGTAG AGGATTTTTT ATCTGTCTCT
GCTGAACATA CAGACATTAT CAAACTAGGT TGGGCAACTT CGTTTGTTAC TCCAAGGCTC
AAAGAAAAGT TAGCGATCTA CCGGGAAGCT GGTATTCCTG TCTATTTCGG GGGGACCTTA
TTCGAGGCTT TTGTTGTGCG AAAGCAATTC GATGAATACC GAAAGTTGCT GGATAAGTAC
GAAATGGCTT ATGCTGAAGT ATCGGATGGG TCTATTGACA TGAATCAGGA TGATAAGTGT
GAGTACATCC GGAAGCTGGC AACACAGGTA ACCGTTTTAT CGGAAGTAGG CTCCAAAGAT
GAGGCTAAAA TCATACCTCC TTACAAATGG ATCCAATTGA TGAAAGCCGA ACTTGAGGCA
GGTGCCTGGA AAGTTATCGG CGAAGCCCGT GAGGGTGGTA CCGTTGGTTT ATTTCGTTCC
AGTGGCGAAG TCCGACAGGG TCTGGTCGAA GAAATTTTAA CCCAGGTTCC ATTTGAAAGT
ATTCTCTGGG AGGCCCCTCA GAAAGAGCAG CAGGTGTGGT TTGTTAAACT CCTGGGTGCT
AATGTCAATC TTGGCAACAT TGCCCCTCAT GAAGTAATTC CTTTAGAAAC GATCCGATTA
GGGCTTCGGG GAGACACCTT TTCACATTTT TTAGATAAGG AATAA
 
Protein sequence
MNYTLTQIPE RTLKPRQSGL TMVMDKGLSL REVEDFLSVS AEHTDIIKLG WATSFVTPRL 
KEKLAIYREA GIPVYFGGTL FEAFVVRKQF DEYRKLLDKY EMAYAEVSDG SIDMNQDDKC
EYIRKLATQV TVLSEVGSKD EAKIIPPYKW IQLMKAELEA GAWKVIGEAR EGGTVGLFRS
SGEVRQGLVE EILTQVPFES ILWEAPQKEQ QVWFVKLLGA NVNLGNIAPH EVIPLETIRL
GLRGDTFSHF LDKE