Gene Slin_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0701 
Symbol 
ID8724431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp857957 
End bp858592 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content45% 
IMG OID 
ProductPeroxidase 
Protein accessionYP_003385563 
Protein GI284035633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0373807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.317023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTC GCTTAGGGGA TATTGCTCCC GATTTTGAGG CCGATACAAC ACAGGGCCAC 
ATCCATTTTC ATGAATGGTT AGGTAACTCC TGGGGTATGT TGTTTTCACA CCCTGCCGAT
TTCACACCTG TCTGTACTAC TGAGTTAGGC AGAACTGCAT TACTGAAGGA TGAGTTTGGC
AAGCGTAATG TAAAAGTGAT TGCGGTATCA GTTGATGATC TGGAATCTCA CAATCGCTGG
ACACCCGATA TCAAAGATGT AACGGGTTCG GAGGTTAACT TCCCAATCAT TGCCGATCCG
GATCGTGTTG TCGCTACCTT GTATGATATG ATTCATCCAA ATGCCAGCGA AAAAGCAACT
GTCCGCTCGG TATTTGTGAT TGGACCGGAC AAAAAAATTA AATTAACCCT AACTTATCCT
GCTTCAACCG GACGCAACTT CAATGAGTTG ATCCGGGTGA TTGATTCGCT GCAGTTAACC
GCAGATTATC AGGTAGCTAC GCCTGCTGAC TGGCAGGAGG GCGACGACGT GATTGTAACC
CCAGCTGTTA CAAATGATCA ATTGGAAGCC AAATTTCCAA AAGGGGTTAC GTTTGTGAAG
CCTTACCTCC GTACTACACC TCAGCCAAAT AAATAA
 
Protein sequence
MSLRLGDIAP DFEADTTQGH IHFHEWLGNS WGMLFSHPAD FTPVCTTELG RTALLKDEFG 
KRNVKVIAVS VDDLESHNRW TPDIKDVTGS EVNFPIIADP DRVVATLYDM IHPNASEKAT
VRSVFVIGPD KKIKLTLTYP ASTGRNFNEL IRVIDSLQLT ADYQVATPAD WQEGDDVIVT
PAVTNDQLEA KFPKGVTFVK PYLRTTPQPN K