| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0699 |
|---|
| Symbol | |
|---|
| ID | 8724429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 855570 |
|---|
| End bp | 857150 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003385561 |
|---|
| Protein GI | 284035631 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00253859 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.376247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGACA CTCGCATCGA TAACACAAAA GACGGCTCGG TAATTCCCGT TCGGTTTACC
CGCTTGTACT TAACGTTGCT CATTATTCTT GCTGTTTTAT TGACAGTAGG GCAGGGGCTC
ACACAATGGC GACTTCGAGC CGTGCAGGAT GAACTATGGG TAATCCGGTA TGCCGCCTTG
CAACGCCACC AAAGCCAACA GATTGTCAAA CAAGTACTGC AAATTGCAGA CCCAGGAGAA
AAAGAAAAGT TTTCCGAAAA TGTAGCCGCC TTAAGGCAGG TATTTCCTGT TTTTGAGCGG
TATCACATAC AAATGCGTCG CGGTGAGGCT GATTATCCGA GGGTATCGAT ACAAAACTCC
GATACGGTGC AGCGGCTATA TGAGGGTATA CGCCCGGAGT TTGAGGCATT TCGCAAAAGT
GCTCATCAGC TAATGCGTTT GCAGGATTTT GAAGCGGTAA GGCAGCCCGA GATTCAGGCG
AGCATTAAAT TAATTCTTGC GAATGAAAAA CCATTTCTGG AGGAGATAGA CCATATCGTG
CGCGAATATA ATGGTGAGCT AAGGGCTAAA TTAACAACGC TTCAGTCCAT AGAGTTGTAT
TTATACATAT TCACCGTTGT TGTGCTAATC GGAATAGGTT TTCTGATTTT TAGACCCGCT
GCCAAAAAGC TTCGACAGAC ATTTGCTCAA CTTATTGAAG CTGAAAGCCA GACAACTGCT
GCGAATAAAA AATTGATGAA CGCTAATCGG TCTCTTAAAG AGACTCGTCA AAAATTATTT
GAGGCTACAA AATTGCAGTA CCAGAAAGAA ATTGATGAAC AGAAACTTCG GACCTCCTAT
CTGATTGCCG GGCAGGAAGA GGAACGTAAA CGCCTGTCTC GCGAGCTGCA CGATGGACTA
GGACAGATGC TTACTGCTAT CAAGCTGCAG ATCGAAGGAC TTGAGGCCAG TTTATCCAGA
ACCACCCCTA CAGACCCCGT AGGAGCAGCC CCCCATTCAA AAAATCTAAA GACACTAAAA
ACTTTAGTGA CTCAAACGAT TCAGGAAACG CGTACTATAT CCAATAATCT CATGCCCAGC
GTCTTAAGTG ACTTTGGCGT GATACCGGCT ATAAAGATGA TAGCCGAACA GGATAGAAGC
GAATCGCTGG ATGTAACGTT CGAAACCAAC TTTACACCTG ATATGTCCCG GTTAAATAAA
AATGTGGAAA TTATGCTGTA TCGGGTTACG CAGGAAGCTG TTAGTAACGC CATACGGCAT
GGTAAGCCAT CCCATATCCA CATTGAACTG AACGACCGCG GAACAACCCT GCAACTGGTT
ATTGCAGACA ACGGGCAAGG GTTTAAAATT CCGCGAAAAA CCCCCGAAAA TGGACAATCA
TCAATTAAAA AATCAGAAAT AAATGATGAT ACTTCCACAG TTTTAGAACT ACGACCCCCC
TCGCAAGGTT TACAAAATAT ACAGGAACGA ACAAAACTGC TTAACGGCAA ATTCAAACTT
CAATCTGTAC TTGGAAAAGG TACCAAGATA CAGATAAGTA TCCCTTATAA AACGCATTTT
GCGCCCCATG ACACCTACTA G
|
|---|
| Protein sequence | MSDTRIDNTK DGSVIPVRFT RLYLTLLIIL AVLLTVGQGL TQWRLRAVQD ELWVIRYAAL
QRHQSQQIVK QVLQIADPGE KEKFSENVAA LRQVFPVFER YHIQMRRGEA DYPRVSIQNS
DTVQRLYEGI RPEFEAFRKS AHQLMRLQDF EAVRQPEIQA SIKLILANEK PFLEEIDHIV
REYNGELRAK LTTLQSIELY LYIFTVVVLI GIGFLIFRPA AKKLRQTFAQ LIEAESQTTA
ANKKLMNANR SLKETRQKLF EATKLQYQKE IDEQKLRTSY LIAGQEEERK RLSRELHDGL
GQMLTAIKLQ IEGLEASLSR TTPTDPVGAA PHSKNLKTLK TLVTQTIQET RTISNNLMPS
VLSDFGVIPA IKMIAEQDRS ESLDVTFETN FTPDMSRLNK NVEIMLYRVT QEAVSNAIRH
GKPSHIHIEL NDRGTTLQLV IADNGQGFKI PRKTPENGQS SIKKSEINDD TSTVLELRPP
SQGLQNIQER TKLLNGKFKL QSVLGKGTKI QISIPYKTHF APHDTY
|
|---|
| |