Gene Slin_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0682 
Symbol 
ID8724412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp846207 
End bp846812 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content42% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385544 
Protein GI284035614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0167525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.29399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG CATACGAAAG CAGAGTACCT GCTACCTATA GGACCGCGTT TGTTGAGAAG 
GTAAAACAAA TAGCGTCTCG ACTCGGAATA AACCCCGATT GGCTAATGAT TGTGATGAAG
TTCGAGACAG CCGGGACATT CTCACCATCT ATTCAGAATG CCGGTTCTAA AGCCGTTGGG
TTAATTCAAT TTATCGAATC GACCGCTACC GATCTCGGCA CAACTCCGGC CAAACTTAGG
GCAATGACAG CCGTTCAACA ATTAGACTAT GTTGAAAAAT ACCTAACCAG GTATAAGGCC
AAATTTGCCA ACGTGTATGA TGTGTACTTA GCGGTTTTTG CTCCTGCATT CCTGGGTAAA
CCCGACTCCC AAATTGTTTA CTCTAAATCG TCAACCAGCG CACTAGGGAA GCAACGGTAC
GAGTTAAACA AGGCACTCGA CACAAATAAA GATGGTAACA TTACTATCTG GGAAATTAAG
CAGGTTCTAA AAACTCATAT TCCGCTTGAT ACTGATTCGG GCGTAAGTCC TGAAAATAAA
GTACTGCCTT TTCTGGCAAT CGTTTTTCTT TCTTTCTTCG TTTTTAACTC CTCAAAAAAT
GTCTAA
 
Protein sequence
MAIAYESRVP ATYRTAFVEK VKQIASRLGI NPDWLMIVMK FETAGTFSPS IQNAGSKAVG 
LIQFIESTAT DLGTTPAKLR AMTAVQQLDY VEKYLTRYKA KFANVYDVYL AVFAPAFLGK
PDSQIVYSKS STSALGKQRY ELNKALDTNK DGNITIWEIK QVLKTHIPLD TDSGVSPENK
VLPFLAIVFL SFFVFNSSKN V