Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0679 |
Symbol | |
ID | 8724409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 844742 |
End bp | 845329 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385541 |
Protein GI | 284035611 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00991502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.404826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTG CAATTCTATC CTTACTATTT TGCCTATCAA CTCTCTGTTT TGGATCTCCC TCACTCGCTC CAAAGTTGTT GGTATTTGAA AGCAAAGTGC CTGCTCCCTA CCGGGCTTCC TTCATTGCTC AAGTCAACGA AACTTCCTTC CGTCTCGGCA TAAAACCCGA TTGGTTAATG GTTGTGATGT GTTTCGAGAC AGCCGGAACC TTTAAGGCCA ACGTCAAAAA CAAGTACTCA GGCGCAACCG GACTTATTCA GTTTATTCCC AGTACGGCCA AACGTCTAGG TACTACCGTT AATCAGCTTG GCCGGATGTC AGCAGTCGAA CAGCTTGCTT ACGTCGAAAA GTATTTTGAA CCCTATGCCG GGCAAATGCG GAGTGTCTAT GATTGTTATA TCGTTGTTTT CGCTCCGGCA TTCCTGGGAC ATCCTGACGA ACAGGTTTTA TATAGTGCCA ACGGTCCAAC CTCACTAGAC CGTAAACGAT ACCGATATAA CAGGATACTA GACGCAAATC GGGACGGTCT TATAACGGTT GCCGATGTAA AAAAGCAGAT ACGTTCGTTT GTACCTACTA ATGTTTAA
|
Protein sequence | MKLAILSLLF CLSTLCFGSP SLAPKLLVFE SKVPAPYRAS FIAQVNETSF RLGIKPDWLM VVMCFETAGT FKANVKNKYS GATGLIQFIP STAKRLGTTV NQLGRMSAVE QLAYVEKYFE PYAGQMRSVY DCYIVVFAPA FLGHPDEQVL YSANGPTSLD RKRYRYNRIL DANRDGLITV ADVKKQIRSF VPTNV
|
| |