Gene Slin_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0679 
Symbol 
ID8724409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp844742 
End bp845329 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385541 
Protein GI284035611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00991502 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.404826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CAATTCTATC CTTACTATTT TGCCTATCAA CTCTCTGTTT TGGATCTCCC 
TCACTCGCTC CAAAGTTGTT GGTATTTGAA AGCAAAGTGC CTGCTCCCTA CCGGGCTTCC
TTCATTGCTC AAGTCAACGA AACTTCCTTC CGTCTCGGCA TAAAACCCGA TTGGTTAATG
GTTGTGATGT GTTTCGAGAC AGCCGGAACC TTTAAGGCCA ACGTCAAAAA CAAGTACTCA
GGCGCAACCG GACTTATTCA GTTTATTCCC AGTACGGCCA AACGTCTAGG TACTACCGTT
AATCAGCTTG GCCGGATGTC AGCAGTCGAA CAGCTTGCTT ACGTCGAAAA GTATTTTGAA
CCCTATGCCG GGCAAATGCG GAGTGTCTAT GATTGTTATA TCGTTGTTTT CGCTCCGGCA
TTCCTGGGAC ATCCTGACGA ACAGGTTTTA TATAGTGCCA ACGGTCCAAC CTCACTAGAC
CGTAAACGAT ACCGATATAA CAGGATACTA GACGCAAATC GGGACGGTCT TATAACGGTT
GCCGATGTAA AAAAGCAGAT ACGTTCGTTT GTACCTACTA ATGTTTAA
 
Protein sequence
MKLAILSLLF CLSTLCFGSP SLAPKLLVFE SKVPAPYRAS FIAQVNETSF RLGIKPDWLM 
VVMCFETAGT FKANVKNKYS GATGLIQFIP STAKRLGTTV NQLGRMSAVE QLAYVEKYFE
PYAGQMRSVY DCYIVVFAPA FLGHPDEQVL YSANGPTSLD RKRYRYNRIL DANRDGLITV
ADVKKQIRSF VPTNV