Gene Slin_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0665 
Symbol 
ID8724394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp831722 
End bp833176 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content51% 
IMG OID 
Productpolynucleotide adenylyltransferase/metal dependent phosphohydrolase 
Protein accessionYP_003385527 
Protein GI284035597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0990908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA GCGATACCTT ACATAAAAAT CCGGTTTTTG ATGTTGTTTC CCAACAGGCC 
GACAGGCTTG GCTTGCCGAC CTACGTCATT GGCGGATTTG TGCGTGATTT AATTTTAGCG
CGACCGTCAA AAGATATTGA CGTTGTTTGT ATTGGCAGCG GCATCACATT AGCCGAGGCC
GTTGGGAAGG CCCTGAACGC GCATGTAGCG GTATTTCCAA ACTTTGGTAC GGCCATGTTG
CGGGCCATGC AGGGTGATGA AGAATGGGAA GTCGAGTTTG TTGGCGCCCG TAAAGAGTCG
TACCGAAGCG AGTCACGGAA GCCCATTGTC GAAGACGGCA CCCTGGAAGA TGACCAGAAC
CGCAGAGACT TTACCATCAA TGCAATGGGG ATAAGCCTCA ACAAAGCCAG TTTTGGCGAA
CTCCTCGATC CATTTGATGG GCTAAAAGAC CTGAAGAAAA AGATCATCCG TACGCCGTTA
AACCCGGATA TAACTTTCTC TGACGACCCG CTGCGGATGA TGCGGGCCAT TCGTTTTGCC
TCGCAGTTGA CGTTCGATAT TGAGCCCGAT ACGTTCGATG CCATCATGCG CATGAACGAG
CGAATCGACA TTGTATCGCG CGAACGTGTA ACCGATGAGC TGAACAAGAT TATCCTGTCG
CCTGTACCTT CCTATGGCTT TAAGCTGCTG TATCATGGGG GCTTACTGGA GCGGATTTTC
CCCGAGCTAA TAGCGCTGAA AGGAGTTGAA ACCATCGAAG GGAAGGGGCA TAAGGATAAT
TTTTACCACA CGCTTCAGGT ACTCGATAAC ATTGCTAACC GGGCTGATAA GAACCAGTAC
CCCGGCGAGG CCGAAAATGA ACTTTGGCTT CGCTGGGCTG CGTTGCTGCA CGATATTGCC
AAACCTGCTA CCAAACGGTT TGATCAGAAA GCAGGCTGGA CGTTCCACGG ACATGAAGAC
CTGGGTGCGC GTTGGGTACC GGGTATTTTC AGGACTATGA AACTGCCTCT GAACGAGCAT
ATGCGTTTTG TTCAGAAACT CGTACGCTTA CATTTGCGGC CAATTGCCCT AACCAAGGAG
CAAATAACGG ACTCGGCGCT GCGTCGGCTT CTGGTCGATG CAGGGGAGGA CCTGGAAGGC
CTTATGGCGC TTTGCCGGGC TGACATTACC TCAAAGAATT ATGAGCGTGT GCAAAAACAC
CTTCGTAATT TTGACCGGGT AGAGCGGAAA CTGCATGACC TCGAAGAGCG TGACAAACTG
CGGAGCTTTC AGCCCGTGAT AACGGGTGAG CTGATCATGG AAACGTTTGG TCTGCCGCCG
TCGAAGGAGG TTGGCGAGAT TAAAACAGTC CTTCGTGAAG CGATTCTGGA TGGTCTTGTT
CCTAATTCGC TCGATGCAGC TTATCCATTC TTACTTGAAG AAGGACGTAA ACGAGGCCTA
ACCCCTGTTG AATAG
 
Protein sequence
MNFSDTLHKN PVFDVVSQQA DRLGLPTYVI GGFVRDLILA RPSKDIDVVC IGSGITLAEA 
VGKALNAHVA VFPNFGTAML RAMQGDEEWE VEFVGARKES YRSESRKPIV EDGTLEDDQN
RRDFTINAMG ISLNKASFGE LLDPFDGLKD LKKKIIRTPL NPDITFSDDP LRMMRAIRFA
SQLTFDIEPD TFDAIMRMNE RIDIVSRERV TDELNKIILS PVPSYGFKLL YHGGLLERIF
PELIALKGVE TIEGKGHKDN FYHTLQVLDN IANRADKNQY PGEAENELWL RWAALLHDIA
KPATKRFDQK AGWTFHGHED LGARWVPGIF RTMKLPLNEH MRFVQKLVRL HLRPIALTKE
QITDSALRRL LVDAGEDLEG LMALCRADIT SKNYERVQKH LRNFDRVERK LHDLEERDKL
RSFQPVITGE LIMETFGLPP SKEVGEIKTV LREAILDGLV PNSLDAAYPF LLEEGRKRGL
TPVE