Gene Slin_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0663 
Symbol 
ID8724392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp829792 
End bp830913 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function UPF0118 
Protein accessionYP_003385525 
Protein GI284035595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.177633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTG AACCTCTACG TCCCCATTAT CATCAGTTCT CTCATTCCCT GCTTTCACTG 
GCTATTCTGA CAGTAGCCAT TTATCTGGGT CAGGATATAT TGGTACCGCT TGCCATGTCG
GGGCTGGTTG CGGTACTGTT GAGACCCGTA GAGGACCGAC TTATCCGCCT GGGTATTCAT
AAAGTTATTG CCATTAGCCT GGCGCTGTTA CTGGCCATTG TTATTGTGGC TGGCGTTACC
ATAATTCTGT CGATGCAACT CTCCGATTTT GCCGACGATT TACCCAAGAT ACGGCAAAAT
TTAGCCGACT TTTTTAGCGA TGCCAAACGA TGGGTTCGGC GTGAATACAA TGTGAGCTAC
CGGCAACAAG AGCAGTATCT TAAGAAAGCT CAGGCGCAAA CACTGGACAG CCTGCAAAGT
CCGGACACGC TCGGTTTCAT TACTGGGCCG CTGGGAACCC TTACGCTGGT TCCCATTTAT
GTCTTTTTGC TGCTCTATTA CCGGACAATG CTACTGCACT TTGTCGTCGT ACTATTTGCT
GAAAAACACA CCAATAATGT ACGTGAAGTG CTGGGGGAGG TAAAGTCGGT TATTCAAAGC
TATATGGTAG GTCTGCTGAT TGAAACAGCC TGTGTAGCAG CACTCAATTC TGTCGGGTTA
CTAATTCTTG GCGTTCAGTA TTCCATCCTG CTGGGAATCA TGGCAGCCAT ACTGAACCTT
GTTCCCTACA TTGGTGGTCT GGTCGCTACA GTACTAACGG TAATCATCAC CTTCAGCAAC
AACCCGGAAA CCTCAATTAT TCTGGGCGTC GTTATTGTTT TTCTGGTCGT GCAATTCATC
GACAACAATG TACTCGTACC GCTTATTGTA GCCTCAAAAG TACGGATCAA CGCGCTTGTA
TCTATCGTGG GCGTACTGAT TGGGGGAGCT TTGGCGGGCG TTTCCGGCAT GTTCCTCTCC
ATTCCTGCCA TCGCGATTTT AAAAGTAATT TTCGACCGGG TCGAAAGCCT GCGCCCATGG
GGTGTACTGC TGGGTGATCA AACCCCCGAA GAAGCAGGTA GCAATCTGTT TCGACTGCCC
AAGCGACGGC GCAAACCCAA AGTCGATGAA GTCAGCGCTT AG
 
Protein sequence
MTSEPLRPHY HQFSHSLLSL AILTVAIYLG QDILVPLAMS GLVAVLLRPV EDRLIRLGIH 
KVIAISLALL LAIVIVAGVT IILSMQLSDF ADDLPKIRQN LADFFSDAKR WVRREYNVSY
RQQEQYLKKA QAQTLDSLQS PDTLGFITGP LGTLTLVPIY VFLLLYYRTM LLHFVVVLFA
EKHTNNVREV LGEVKSVIQS YMVGLLIETA CVAALNSVGL LILGVQYSIL LGIMAAILNL
VPYIGGLVAT VLTVIITFSN NPETSIILGV VIVFLVVQFI DNNVLVPLIV ASKVRINALV
SIVGVLIGGA LAGVSGMFLS IPAIAILKVI FDRVESLRPW GVLLGDQTPE EAGSNLFRLP
KRRRKPKVDE VSA