Gene Slin_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0662 
Symbol 
ID8724391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp828788 
End bp829795 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content51% 
IMG OID 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003385524 
Protein GI284035594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.127413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTATA AAGCACTTGC TCTTCAACTA ACTTGTCAGA CAATAAATTA CTGCCAAACC 
CGTGATGAGT CGGAAGCAGC CATGCTCCAG ACAATAGAAC GGATTGAACG TCAGATTGCC
GCATCGGTTG GGCTGCTTGG CCGTGATACG TTACTGGTTG TAGTACCCGA ATTTTTTCTA
ACCGGGCCGC CAGTGGACGA AACGGTAGAT CAATGGCGTG AAAAAGCGGC TCTGGACATC
GATGGTCGTA TTTATGAAGC GTTGGGAGCT ATGGTGCAGC GTCAGCAGAT TTACTTCTCG
GGCAATGCTT ACGAACAGGA CCCATTCTTT CCAGAGCTTT ACTTCCAGAC CAACTTTATA
ATCGGACCCA GTGGCGATGT GCTCCTTCGC TATCGGCGAC TGAACGCCAT GTTTACCCCT
ACACCGCACG ATGTTTGGGA GTTGTATTTA GATGCTTACG GGTACGACTC GCTGTTTCCG
GTAGTGAAAA CAAACATCGG AAACCTGGCT TGCATTACGT CGGAAGATAT CCTTTTCCCG
GAAGTCGCCC GCTGCCTGGC TATGCGCGGG GCGGAGGTAC TCATTCATTC AACGGCCGAA
ATTGGCAGCC CTTTACTCAC GCAGAAAAAC ATTGCCAAGC AGGCGAGGGC TATCGAGAAC
ATGGCCTATG TTGTATCCGC CAATTCAGGA GGGATATTGG GAAGTGTGCT GCCCGGCAAT
ACAACCGACG GAGGGTCCAA AATAATTGAT CCAAGAGGTA CGGTACTGGC TGAGGCCGCT
TATGGAGAGA GCATCGTGGC AAACGCGGAT ATTGACCTGG CCGCTTTACG TGAGTTTCGG
CAGCGCCCGG CCGCCGGAAA TCTACTGGCT CGCCAGCGCC TGGAATTGTA CACCGAAAGC
TATAACCAAC GTGTAGTATT CCCGCCTAAT ACGCTCCTGA GCCAGCCTGC CGAGCGCCAG
CATTTTATGC GAACCCAGCA GGATGTCATT AAGAAGCTGT ATAGCTAA
 
Protein sequence
MSYKALALQL TCQTINYCQT RDESEAAMLQ TIERIERQIA ASVGLLGRDT LLVVVPEFFL 
TGPPVDETVD QWREKAALDI DGRIYEALGA MVQRQQIYFS GNAYEQDPFF PELYFQTNFI
IGPSGDVLLR YRRLNAMFTP TPHDVWELYL DAYGYDSLFP VVKTNIGNLA CITSEDILFP
EVARCLAMRG AEVLIHSTAE IGSPLLTQKN IAKQARAIEN MAYVVSANSG GILGSVLPGN
TTDGGSKIID PRGTVLAEAA YGESIVANAD IDLAALREFR QRPAAGNLLA RQRLELYTES
YNQRVVFPPN TLLSQPAERQ HFMRTQQDVI KKLYS