Gene Slin_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0647 
Symbol 
ID8724376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp813379 
End bp813966 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content52% 
IMG OID 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_003385509 
Protein GI284035579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.405767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.146567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA CGCAAAATGA AACCGTTGTG TCGCTGCTGA ATCTGGTAGG GCTCAACGCC 
GAAGGTACCT ATCCGGCATT GGACGCGTTG GCGCAAGCCG ACCACCGTTA CCTGCGTGAT
TTGAAAATCA ACGTGGGTAA TGTGCTGAAC AACAGCCAAA CACTTACCAA AAAAGAAACC
CTGTTGCTGG CCCTGTCGGT GGCCGTAAAC GAGAAACATC AGCCGCTGAT GGACTCGCTG
ACGGATGCTG CCCGGCAGGA AGGGGCTACG ACTGCCGAAC TGGCTGAAAC CATTGCCTGC
ACCTCGCTGC TCAGCACGAA CAACGTATTC TACCGGTTCC GGCATTTTAT CAGCAAAGAT
TATTACCAGC AGACACAGCC GGGTATTCGC ATGAGCATCA TGATGAATCC GGTGCTGGGC
AAAGAGTTTT TTGAACTGAT GAGCCTGGCC GTTTCGGCCG TTAACGGCTG TGAACTCTGC
GTTCGGTCGC ACGAAGAGAG CGTCCTTAAA CACGGCTCCA GCGAGCCACG TATTTTCGAC
GCTATCCGGT TAGCATCGGT TATAAAAGGA CTGATTACAC TGCTATAA
 
Protein sequence
MTTTQNETVV SLLNLVGLNA EGTYPALDAL AQADHRYLRD LKINVGNVLN NSQTLTKKET 
LLLALSVAVN EKHQPLMDSL TDAARQEGAT TAELAETIAC TSLLSTNNVF YRFRHFISKD
YYQQTQPGIR MSIMMNPVLG KEFFELMSLA VSAVNGCELC VRSHEESVLK HGSSEPRIFD
AIRLASVIKG LITLL