Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0647 |
Symbol | |
ID | 8724376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 813379 |
End bp | 813966 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_003385509 |
Protein GI | 284035579 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.405767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.146567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTA CGCAAAATGA AACCGTTGTG TCGCTGCTGA ATCTGGTAGG GCTCAACGCC GAAGGTACCT ATCCGGCATT GGACGCGTTG GCGCAAGCCG ACCACCGTTA CCTGCGTGAT TTGAAAATCA ACGTGGGTAA TGTGCTGAAC AACAGCCAAA CACTTACCAA AAAAGAAACC CTGTTGCTGG CCCTGTCGGT GGCCGTAAAC GAGAAACATC AGCCGCTGAT GGACTCGCTG ACGGATGCTG CCCGGCAGGA AGGGGCTACG ACTGCCGAAC TGGCTGAAAC CATTGCCTGC ACCTCGCTGC TCAGCACGAA CAACGTATTC TACCGGTTCC GGCATTTTAT CAGCAAAGAT TATTACCAGC AGACACAGCC GGGTATTCGC ATGAGCATCA TGATGAATCC GGTGCTGGGC AAAGAGTTTT TTGAACTGAT GAGCCTGGCC GTTTCGGCCG TTAACGGCTG TGAACTCTGC GTTCGGTCGC ACGAAGAGAG CGTCCTTAAA CACGGCTCCA GCGAGCCACG TATTTTCGAC GCTATCCGGT TAGCATCGGT TATAAAAGGA CTGATTACAC TGCTATAA
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Protein sequence | MTTTQNETVV SLLNLVGLNA EGTYPALDAL AQADHRYLRD LKINVGNVLN NSQTLTKKET LLLALSVAVN EKHQPLMDSL TDAARQEGAT TAELAETIAC TSLLSTNNVF YRFRHFISKD YYQQTQPGIR MSIMMNPVLG KEFFELMSLA VSAVNGCELC VRSHEESVLK HGSSEPRIFD AIRLASVIKG LITLL
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