Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0636 |
Symbol | |
ID | 8724365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 797065 |
End bp | 799554 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | peptidase S9 prolyl oligopeptidase active site domain protein |
Protein accession | YP_003385498 |
Protein GI | 284035568 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.293087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTCACA ACCTGACTAC TCGAAAAAGT CGATTGTTTT TGGTTATCCC CTGGCTGGCT GCTTCGTTAG CCGGACACGC TCAGGATGCG CCGGGCTATC AAACACCGCC CAAAGCGCTG GCCGATCTGG TTACGGCTCC CCTGACACCC ACGGTCAGCA TGTCGACGAA AGGCGATATG ATGCTTATTC TTGAACAGGC TGCCGCTCCC GGCATCGATG AACTGGCGCA GCCGGAGCTT AAACTGGCCG GGCTGCGACT AAATCCGGCC AACAACGGTC CCAGCCGTGC CCGCTACATA ACGGGTCTGA AGCTCAAAAA ACTGACCGAC AAAGATGAGA AAGCAATAAC CGGTTTGCCT GCCGAACCTC TCATCAGCTT TGTGCAATGG TCGCCGGATG GAACAAAGGT GGCGTTTGCC AACTCGACTG ACACCCGGAT TGATCTGTAC ATAGCCGATG CGGCCAGTTT GTCGGCGCAA AAGGTTGGTT CGCTGGCGCT CAACGCAACG ATGGGTTCAC CGTATTACTG GGTGTCGGAC AGCAAGAGCC TGATCGTGAA AACAGTTCCC GTCGGGCGTG GGGCCGCTAT TGAAGTGAGC CGGGTGCCGT CGGGGCCGAC CACGCAGGAA AACGTGAAAG GATCGCGCGG GCAGGCTCCA ACGTACCAGG ACTTACTCAA AAGTCCATCG GACGAAAAGC AGTTCGCCTT TTACACAACG TCGCAGGTTG TACGACTGGC GCTGGATGGA ACGGCCACCA ACATTGGTCA GCCGGGCATT ATCCGTACGG CAGAGCCATC GCCCGATGGG CAGTATGTGA TGATCGAGAC GGTACATACG CCGTTTTCGT ATCTGGTGCC CGTTGGCCGG TTTCCGCTGA AGACCGAGAT TTATGCCATG GCCGGGGCGT TGGTAAAAAC GCTGAATGAT GGCCCCTTGC AGGAGGCTGT GCCTTACAGC CGCGATGGGG CACCCACGGG GCCCCGCGAC TTCAACTGGC GGGCCGATGC CCCCGCTTCG GTGTATTATA CCGTGGCACA GGACAATGGC GACCCTAAAG TGAAAGCTGA GGTTCGGGAT AAAGTTTACC TGATCGAAGC TCCTTTTTCG GCTCAGCCCA AAGAAATCTA TGCGGCTCAG TTCCGTTTCG AAAATTTCGA CTGGGGCAAT GAGTCGACGG CACTGGCTAC CGAACGCTGG TGGCAGAATC GCAAGATCAT CACCAAAATC GTTAGTCCGG CCAACTGGCA AACGTCGGTG CTGTTCGACC GTTCGTACGA AGACCGGTAC ACCAACCCCG GTCAGCCCGA TACGAAGCAC AACCAGTATG GCCGCGAAGT ATTGAATCTG CTCCCGAGTG GCGAAATCCT GATGCTGAAC GCCGTAGGTT CATCGCCCCA GGGCGACCGC CCTTTTGTGA GTCTGCTGAA CTTGAAGACG AAGCAAACCC GCGAACTCTG GCGGTCGGCG GCTCCGTATT TCGAGCGGCC CGTTGCTGTG CTGGATGCAG CTAAACAGGT GATCCTGACC ACCCGCGAAA CGCCCGACGA AAACCCGAAC TACTTTGTTC GTAATCTGAA AGCCAGAATT GCACCTATTC AGGCAACGTA CTTCCCGCAT CCGTATCCGC AACTGAAAGG AATCCAGAAG CAGCAGCTTC GCTACAAGCG GGCCGATGGC GTTGAACTGA CGGCTACGCT GTATTTGCCT GTTGGCTACA AGAAAGAGCA GGGGCCGCTG CCAACGTTCC TGTGGGCGTA TCCGGCCGAA TTCAAGAGTA AGGAAGCGGC CAGTCAGGTG GCTGGTTCGC CGTATCAGTT TAACCGAATC AGCTACTGGG GTGGTGCCGC TTTCGTGACG ATGGGCTATG CCATTCTGGA TAACGCCAGC ATCCCCATTG TGGGTGAGGG CGACAAAGAA CCGAACGATA CCTACGTTGA GCAGCTGGTG TCGAGCGCCA AAGCGGCCAT TGACGAAGGC GTGCGGCTGG GCGTTGTCGA TTCGAGTCGG GTAGGGGTGG GTGGCCACTC GTACGGTGCG TTCATGACGG CCAACCTGCT CACCAACAGC AAGCTTTTCA AAGCGGGTAT TGCCCGGAGT GGTGCTTACA ATCGTACCCT AACCCCATTT GGCTTTCAGA ACGAGCAGCG CAGTTACTGG CAGGCACCGG ACGTCTACAA TAAAATGTCG CCATTCATGA ATGCCGACAA GATGAAGACG CCCCTGCTGC TGGTTCATGG CGAGGCCGAC AACAACACGG GTACGTTCCC GATTCAGTCG GAGCGGTATT ACAATGCGCT GAAAGGTTTC GGCGCTACGA CCCGGCTGGT GTTCCTGCCC TATGAAAGTC ACGGCTATAC CGCCAAAGAG TCATTGCTGC ATATGTTGTG GGAAATGAAC GGCTGGATGG ATAAATACGT CAAGAATCCG GCTCCCGCAA CTCAGAGTAA CAAAGCCGGT AAAATGGGCG GAGGGAATAA TGAGAAATAG
|
Protein sequence | MLHNLTTRKS RLFLVIPWLA ASLAGHAQDA PGYQTPPKAL ADLVTAPLTP TVSMSTKGDM MLILEQAAAP GIDELAQPEL KLAGLRLNPA NNGPSRARYI TGLKLKKLTD KDEKAITGLP AEPLISFVQW SPDGTKVAFA NSTDTRIDLY IADAASLSAQ KVGSLALNAT MGSPYYWVSD SKSLIVKTVP VGRGAAIEVS RVPSGPTTQE NVKGSRGQAP TYQDLLKSPS DEKQFAFYTT SQVVRLALDG TATNIGQPGI IRTAEPSPDG QYVMIETVHT PFSYLVPVGR FPLKTEIYAM AGALVKTLND GPLQEAVPYS RDGAPTGPRD FNWRADAPAS VYYTVAQDNG DPKVKAEVRD KVYLIEAPFS AQPKEIYAAQ FRFENFDWGN ESTALATERW WQNRKIITKI VSPANWQTSV LFDRSYEDRY TNPGQPDTKH NQYGREVLNL LPSGEILMLN AVGSSPQGDR PFVSLLNLKT KQTRELWRSA APYFERPVAV LDAAKQVILT TRETPDENPN YFVRNLKARI APIQATYFPH PYPQLKGIQK QQLRYKRADG VELTATLYLP VGYKKEQGPL PTFLWAYPAE FKSKEAASQV AGSPYQFNRI SYWGGAAFVT MGYAILDNAS IPIVGEGDKE PNDTYVEQLV SSAKAAIDEG VRLGVVDSSR VGVGGHSYGA FMTANLLTNS KLFKAGIARS GAYNRTLTPF GFQNEQRSYW QAPDVYNKMS PFMNADKMKT PLLLVHGEAD NNTGTFPIQS ERYYNALKGF GATTRLVFLP YESHGYTAKE SLLHMLWEMN GWMDKYVKNP APATQSNKAG KMGGGNNEK
|
| |