Gene Slin_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0633 
Symbol 
ID8724362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp795122 
End bp796072 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPolynucleotide 5'-hydroxyl-kinase 
Protein accessionYP_003385495 
Protein GI284035565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0439631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTTA TGAAAAAAGT CCTGATTCTA ACCGGCCTGA GTGGCAGTGG TAAAACAACC 
TTTGCCCGAA CGTTTTGCGA AGAACACCCA AACTGGCTGC GTGTTAATCG GGATGATTTT
CGGCGAAGTC TGCTGTCCGT ACCGCTTCGG GAGTATTATG AAACCTGGCC GGAGCGGGAG
AAAGACCGGG TCGAAATGGT CGTTAATGAA TTGCAGAAAG CCGCTATTCT GGAAGGGCTG
ACGCGTGGCT GGCATATACT CATCGACAAT ACAAGCCTTA AGCTAAGCTA CATCAACGAA
TTTCGACAAC TGCTGACACG TCATTTCGAC CGCGTAGAGA TTGGGTATAG GCTGCTTCAG
GTGCCGCTGG AAGAATGCAT CCGTCGCGAC CGGGAGCGAC CCGATTCGGT AGGCGAGGAG
GTGATCCGCC GACAGGCTGA ACAGCTAACG TCGCTGAAGA GGTATTTTAA ATTCCAGACC
GAAATCCTGA CCCGACCGGC TACTTTTCAA CGAGAGCAGG ACGAGACTTT ACCCCGCTGC
ATACTGGTCG ATATCGACGG TACGGTGGCT GACCGAGGGA CGCGGTCGCC TTTCGCCTGG
CATCGGGTGG GGCTCGATAC CCCTAAATGG CCCGTTATCC GGTTGGTGCA GGCCATGCGG
GCGTCGGGCT ACGCGATTAT ATTCTTTTCG GGTCGCGATG CCATTTGCCG TCCGGAAACA
ACGACCTGGC TGAATCAACA CTTTGGTTGG CAGGAAGCAG ATTATCTGTT GTTCATGCGC
CGGGAGCGCG ACAACCGCAA AGACTCCATT GTAAAACAGG AGCTATTCGA CCAGCATATC
GCTGGCCGCT ATTACGTAGA ACTCGTTGTC GATGATCGCC AGCAAGTGGT GGACATGTGG
CGACGGACTC TCGGCCTGAC CTGCATTCAG GTCGACTATG GAGATTTCTG A
 
Protein sequence
MYFMKKVLIL TGLSGSGKTT FARTFCEEHP NWLRVNRDDF RRSLLSVPLR EYYETWPERE 
KDRVEMVVNE LQKAAILEGL TRGWHILIDN TSLKLSYINE FRQLLTRHFD RVEIGYRLLQ
VPLEECIRRD RERPDSVGEE VIRRQAEQLT SLKRYFKFQT EILTRPATFQ REQDETLPRC
ILVDIDGTVA DRGTRSPFAW HRVGLDTPKW PVIRLVQAMR ASGYAIIFFS GRDAICRPET
TTWLNQHFGW QEADYLLFMR RERDNRKDSI VKQELFDQHI AGRYYVELVV DDRQQVVDMW
RRTLGLTCIQ VDYGDF