Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0621 |
Symbol | |
ID | 8724349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 778076 |
End bp | 782005 |
Gene Length | 3930 bp |
Protein Length | 1309 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003385484 |
Protein GI | 284035554 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.288255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATTG TGAATGAAGC AGGACGGCTA GACGCGTTAA AGAGCTACAC GATTCTGGAT ACCTTACCCC AGAAAGAATT CGACCGGCTT ACGGAACTGG CCTCCCTGAT TTGTCAAACG CCCATATCGC TCATCACACT ACTCGATCAG GACAGGCAGT GGTTCAAATC CCGAATAGGC CTTAACCTGT CGGAAACCAA ACGGGAAATT GCTTTCTGCC GGTATACCAT CCTCGAAGAA GGGTTAACGG AAATTGAAGA TGCAACGCTG GATAGCCGGT TCAGCGAAAA CCCGCTGGTT CTATCCGATC CGTCAATCCG TTTTTACGCG GGTTACCCCC TAACGGACCC TAATGGGTTT ACCCTTGGAA CAATTTGTGT ACTGGACAAA GTACCCCGAA AGCTTTCTCC AACTCAGCAA GAGGCTTTGA GGGTACTGGC TGAGACGGCC ATTGAGCTGA TTATCAGGCG ACGTCAGACC GAGGAGATTA TTTACGTAAA ACAACTTTTC GACTTATCGA ACGACCTCAT CTGCCTGGCA GGTGTGGATG GTTTCTTAAA AAAAGTTAAT CCTGCTTTCC ATCAGGTACT GGGCTGGGAC GAGCATTATT TACTTAGTCA TTCGTTTTAT GAACTGGTTC ATCCGGACGA CCTGATCGAT ACCCAGCGCG AAGTTGCCCA GTTAGCCAAC GGCAAGAAGA CCATTAATTT TGTCCATCGG TTTCGGTGCG TTGACGGTAC CTACTGCTAT CTTCAGTGGG TGGCTACCCC GGAACCCGCA ACAGGGTACG TATTTGGCAT TGCGCGCAAT GTTACCGAGG AAAAACAGCG GGAACTAAGG CTGAACCATT CGGAAGCCAA GTTCCGAACC TTCTTTGAAA ACTCTCAGGG GTTGCTGTGT ATCCACGACC TTACCGGTAA AATGTTATCC GTCAATATGG CCGGGGCGCA GGCCTTAGGC TACCAGCCCG ACGAATTGGT TGGGCGTCGG CTGGCGGATA TTGTTTCGAT GGATCATCAG GAAGGGCTGG CCCGCTATTT ACAGATCGCC CATACAAAGG GACGGGCGAG CGGCCTGATG CACACGCTTC ATAAAGACGG TTCGCTACGG ATATGGCTGT TCAACAACAT TCTGGAGCGA GACCTGGACG AGCAGCCCTA CATTCTGGGC AACGCCATTG ACATAACCGA ACGGCATCGC CTGGAAGTTG AATTGAACCG GACCCAGCAG ATGCTGTCAC AAACCAATGA AGTGGCCCGA ATTGGTTTCT GGGAAGTCAA TGTGCTGGAA CAAACCATCC ACTGGTCGGC CGTGACCCGC TCCATTCACG AAGTTAGCGA CGATTTTATC CCGAATCTGG AGACAGCCAT CTACTTTTTC AAAGGAGACC ATCAGGTAAT CATCCGCAAT GCCGTGACGC GGGCCATTGA AGAAGGCGTA GGCTATGATC TGGAATTGCA GATTGTAACG GCTAAGGGTC AAACGGTATG GGTAAGAGCA CTGGGCATTC CCGAATTTGA TCAGGGCCGA TGCCTGCGCC TTTATGGCAC GTTTCAGGAT ATTGATGAGA AGAAGAAAGT TGAACAGGCC TTATTAACCG AGAAACTACG ATTGGCCGCT TTCGTTAAAC ATGCGCCCGC TGCGGTAGCC ATGTTCGACC TGCAGATGAA CTACATCGCT GTCAGTAACC GCTGGATGGA AGACTACCAG CTCACAGGCA CGATTATCGG GCGATGTCAT TATGAGGTGT TTCCCACAAC GCCCGAAGCC TGGAAAGCCA TCCATGCCCG GTGTATTCAA GGGGCAGTGG AAAAAAAAGA AGAAGATGTG TGGCGACCGC TGGGCTGGAC TCATGATCAG TATGTGCGGT GGGAGGTAAG GCCCTGGTAC CAGTTTGACG GAACAATTGG GGGCATTATG ATGCTGACCC AGGATATAAC GGAGATTTGC TTACAGCGGG ATGAGTTGAA AAAGGCCAAA TTGGTGGCCG AGCAGGCGAG TCAGGCTAAA TCGGAATTTC TGGCCAACAT GAGCCACGAA ATCAGAACGC CCCTCAACGG GGTCATCGGT TTTACGGATC TGGTGCTGAA AACAACCCTG ACACCTACCC AGCATCAATA CTTAACCATT GTCAATCAAT CGGCGAATGC CCTGTTGACG ACAATTAATG ATATACTGGA TTTTTCTAAA ATCGAAGCGG GCAAACTGGA GCTCACTATC GAAAAGGTAG ATATTTATGA ACTGACCAGC CAGGCCGCCG AAATCATTAC CTATCAGGCT CAAACCAAAG GGCTGGAAGT GCTGCTGAAT GTGGCCCCTG ATGTTCCCCG GTTTATCTAT ACCGATTCGG TACGGTTGAA ACAGGTGCTG GTTAATCTGC TGGGCAATGC CGTTAAGTTT ACCCAGCAGG GCGAGATCGA ACTGAAAGTC ACCGCAACGA GTGTATCAGA GCCCGGAGAA GGAGCCATCC GGTTTGCCGT TCGTGATACA GGCATGGGTA TTCGGGCGGA TATGCAGCAG AAAATCTTCC ACGCCTTCTC TCAGGAAGAC CCATCAACGA CCAAGAAGTT TGGGGGCACC GGACTCGGGT TAACGATCGC CAACAAGCTA CTGGGTCTTA TGGGAAGTCA GCTGGAACTC ATCAGCGAAC CCGGAGCAGG CAGCTGCTTT TATTTCACCG TTCAGCTGAA GGTCGAAGCC GGGGATGCCG TCGACTGGGG CGATCTGAGC TGGATCAAAC GAGTGCTGCT TGTGGATGAT AATGCCAATA ACCGGTTAAT TCTACGGCAA CTGTTTTTAC TGAAACAAAT TGCCGTAGAA GAAGCCAGCA ATGGCTTTGA AGCGCTTCAG TTACTGGCCG CCCAACCCCA GGGGTTCGAT GTCATCCTGA TGGATTACCA TATGCCTTAT CTGGATGGGC TGGAAACGAT TGAAAAGATA CGGGCTAACT TTTCAACCTC TCCGGCTGAA CCAACCATTC TGCTCCTGCA CAGCTCGTCG GAAGACGAAC GAATCGATAA GGCCTGCGCC CGGTTAGGCG TCCATCAACG GTTCGTGAAA CCGCTTAAAA TAGATGATCT GTTCGTAGTA TTAGGCCGCA TCGGCCGGCA TGAAAGCCAG TCAGACATTA TTCAGGAAAA TGCCACAACC CCGCCGGTAG CACCCAAAAG CATTGCAGCT CCTCTTAAGG TGCTGATTGC CGAGGATAAT CCGGTAAACC AGCTGCTCAC CCGGACAATC ATTAACCGGA TAGCACCCCA GGCCCAAATC GTCGAAGCCG CCAACGGAAT AGAAGCCATT CAGCTTTATC GGCAGGAAAG GGCCGATCTG ATTTTGATGG ATATTCAGAT GCCCGAGATG AATGGCTACG AGGCCACACG CCAAATTCGC GAACTCAACC CAACCGCTCC CGTCCGCATT ATTGCCCTCA CCGCCGGTAC GGTAAAGGGC GAACGTGAAA AATGTCTGGC AGCGGGTATG GATGATTTCA TTACCAAACC GATTGTGGAA GAATCGCTTC GTCCCTTTTT TGACAAGTGG ATGGAGGAAC GAACGGATAC TGAGTCAGCA TCGGACAAAC TAGCGGAAGA GGAACTTCAT GTCGACTGGC GTGTTCTGGA GTCGATTGGC GGTAACGATC TGATTTTGCT ACAGTCGTTA CGGGCGACAG CGAGCCAGGA GTTAACCCAG TCCATCGTGA CGCTTCAACA GGAAATCCAG CACCAGAACC TGGCGGGATT AAAAGCACTG GGGCATATGC TGCGGGGAAC GGCTCTGAGC GCGGGTATGC CCAGACTCGC CCGACTCGCT CAACGTCTTG AGCTATCAGA CACGTTTGAA GGGGCAATTA CAAGCGCCCT CCACACTGAT ATTGAGCAGG AATGTAAAAC CATTCTGGCC CTTATGAGCC AGGCTAGCTC GGTCGGGTAG
|
Protein sequence | MDIVNEAGRL DALKSYTILD TLPQKEFDRL TELASLICQT PISLITLLDQ DRQWFKSRIG LNLSETKREI AFCRYTILEE GLTEIEDATL DSRFSENPLV LSDPSIRFYA GYPLTDPNGF TLGTICVLDK VPRKLSPTQQ EALRVLAETA IELIIRRRQT EEIIYVKQLF DLSNDLICLA GVDGFLKKVN PAFHQVLGWD EHYLLSHSFY ELVHPDDLID TQREVAQLAN GKKTINFVHR FRCVDGTYCY LQWVATPEPA TGYVFGIARN VTEEKQRELR LNHSEAKFRT FFENSQGLLC IHDLTGKMLS VNMAGAQALG YQPDELVGRR LADIVSMDHQ EGLARYLQIA HTKGRASGLM HTLHKDGSLR IWLFNNILER DLDEQPYILG NAIDITERHR LEVELNRTQQ MLSQTNEVAR IGFWEVNVLE QTIHWSAVTR SIHEVSDDFI PNLETAIYFF KGDHQVIIRN AVTRAIEEGV GYDLELQIVT AKGQTVWVRA LGIPEFDQGR CLRLYGTFQD IDEKKKVEQA LLTEKLRLAA FVKHAPAAVA MFDLQMNYIA VSNRWMEDYQ LTGTIIGRCH YEVFPTTPEA WKAIHARCIQ GAVEKKEEDV WRPLGWTHDQ YVRWEVRPWY QFDGTIGGIM MLTQDITEIC LQRDELKKAK LVAEQASQAK SEFLANMSHE IRTPLNGVIG FTDLVLKTTL TPTQHQYLTI VNQSANALLT TINDILDFSK IEAGKLELTI EKVDIYELTS QAAEIITYQA QTKGLEVLLN VAPDVPRFIY TDSVRLKQVL VNLLGNAVKF TQQGEIELKV TATSVSEPGE GAIRFAVRDT GMGIRADMQQ KIFHAFSQED PSTTKKFGGT GLGLTIANKL LGLMGSQLEL ISEPGAGSCF YFTVQLKVEA GDAVDWGDLS WIKRVLLVDD NANNRLILRQ LFLLKQIAVE EASNGFEALQ LLAAQPQGFD VILMDYHMPY LDGLETIEKI RANFSTSPAE PTILLLHSSS EDERIDKACA RLGVHQRFVK PLKIDDLFVV LGRIGRHESQ SDIIQENATT PPVAPKSIAA PLKVLIAEDN PVNQLLTRTI INRIAPQAQI VEAANGIEAI QLYRQERADL ILMDIQMPEM NGYEATRQIR ELNPTAPVRI IALTAGTVKG EREKCLAAGM DDFITKPIVE ESLRPFFDKW MEERTDTESA SDKLAEEELH VDWRVLESIG GNDLILLQSL RATASQELTQ SIVTLQQEIQ HQNLAGLKAL GHMLRGTALS AGMPRLARLA QRLELSDTFE GAITSALHTD IEQECKTILA LMSQASSVG
|
| |