| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0616 |
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| Symbol | |
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| ID | 8724344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 764436 |
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| End bp | 767627 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003385479 |
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| Protein GI | 284035549 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC AAGTAAAAGC ATCCGTCAGT TTTCCTGATC GTAGTACAGG CAAGCACCTC
CGGCGGGTTT TCCGTCTGAC CATTTTTCTC CTCGGTATCG AAGGGGCGTT GGGTCTGATG
AACCTGTCTA CCGCAAACCA GGCCTTCGCA CAGCAGGTGA AACAGCTTAC AGGTCGCGTG
CTGGATAGCC AGAAAAATCC CGTTCCGGGT GCAACGATTG TGGCCAAAGG CAGCAATACG
GGCGTTACAA CCGATGCCGA CGGAAAGTTT ACGCTTTCCG TTTCCAATAC GATCAGTTCA
CTCGTCATCT CTTATATTGG CATGACACCA CAGGAAATTG AAGTGGGTAA TCGCTCCGCA
ATGGGTGATA TCGTTCTGTC GGAAAGCAGC ATGGTATTAC GCGAAGTGGT CGTAACGGCA
CTCGGTATCG AACGAGCGGC CAAAACCATT ACCTACTCGA TCCAGAAACT TGGTGGTGAG
CAAATTAACG AGGTGCGGGA TGCTAACTTT ACCAACACAC TCTCCGGCAA AATTGCGGGC
TTGACCATTA CGCCATCGGC AAACGGGCCC GGCGGTGCAA CCCGCATTGT GCTCCGGGGC
AACCGCTCCA TTCAAGGCTC CAACAATGCC CTGATCGTTG TCGACGGTGT GCCTATCGAC
AACTCAACGC CTGCGGGCCA GGTGCGAAGT GATGCCGGTG GACAGAGCGG CAGCGATGGC
GCGTCGAGCA TAAACCCCGA TGATATTGAG TCACTTAACG TACTGAAAGG AGCCGCCGGA
GCCGCCTTGT ATGGCAGCCG GGCCGCCAAC GGGGTTATCA TTATCACGAC GAAAAGAGGA
AAAAGCGGCA AGCTTGACGT CAATATCAAC TCAGGGGTGA CTATCGACCG GGCTTTAACC
ACGCCTAATT TACAGAATGC TTATGCTCAG GGATCGGGAG GAACTTACTC AACACTGGCA
AGCGGAAGCT GGGGGCCAGC CATCAGCGGA CAGAGTGTAA CCAACTGGCA GGGCCAAACG
GTTAATCTTC AGGCTTATCC CGACAATATC AAAGACTTTT TCCAGACTGC GGTATCGACT
AATAACTCAG TGGGCGTGAG TGGCGGCTCC GAGAAAATAC AGACCTATCT GTCGTATTCA
AATAACTACA TCAACGGCAT CGTACCCAAT AACCGCCTGT CGCGCAATAC CTTCAATGGT
CGGATGAGCG TCGATTTAAC GAGTCGGCTA TCCGTCGATG CCAAGGTCAC TTACATGCTT
CAGAACATTT ACGATAAGCC CGGTGTGGGT GGCGACGGCC TCGTAGTTGC CAACATTTTC
AGGATTCCCC GAAGTGTGGA CCCCGAAACC CTGAAGTCCT ATAAGACGGT GAACGTCAGT
GGAATTGAAA CGCCCACCTA CTGGACCACC ACGGATGCCG TCTATATGAA CCCTTACTGG
ACCATCAACA ATACCCACCA CGACGAGAAC CGGAGTCGGG TAACGGGCCT GCTGGTGATG
CGCTACAAAC TTACCGACTG GCTGAACATT CAGGGGCGTG TCAGTTCCGA CAGTTACAAC
GACTTCATAA CCCAGAAATA CACCAACAAT ACCGTCAACT ACGCTCGTCA GCCCGGTGGT
TTTTATTCGG AAGGCAATGA TTTCATTGCC GAGCGCAATC TTGATGTATT GCTGACCGGT
ACTAACCGGC TGACGGATGA TTTGAAAGTA AACTATAACC TGGGTGGTTC TGTGCTGAGC
CGGCGCCTGC GCCACCGCGT TAATGCGGCC GACGGCCTTG GCTTCCCCAA CAAATATGAC
CTCAGCTATG CTACTACGCT GAAAGTAGAA GCCGTTACCA GCAAACGTGA ACTTCAGTCA
GTTTACGGAA CGGCCCAATT TGCCTATCGG GATTACCTGT TTCTGGACCT GACAGCCCGC
AACGACTGGT CGAGCACGTT ACCCTCGCCT TATGCCTACT TTTACCCATC TGTAGGTATA
TCAGCAATCC TTTCCGAAAT GGTCAGGATG CCCGCCTGGA TTAGCCTTGG CAAAGTTCGG
GCCTCGGTGA CCAAGGTGGG GAACGATGCC AGCCCTTATC TGTTAGGCCA GACGTATAGC
TATATCCGTG GGGGCTTCGG AGGCTATATT GCCAGCAGCA GCACCAAAGC TATATCAGAC
CTTAAACCGG AGCTGACCCA ATCGCTGGAG ATCGGCACGG AATGGGGCTT TTACAACAAT
CGGCTGGGCC TTGACCTAAC CTATTACAAA ACCAACTCTC AGAACCAGTT GCTCCAGGTC
GCTTCACCGG CCTCGTCCGG CTATTCGACG CTGAATGTGA ATGCGGGCAA TATCCAGAAC
TCGGGTGTAG AGGTGGTGTT GACCGCTAAG CCAATTGTAA CAAAGGATTT TACCTGGAAT
ATTGGCCTGA ACTATGCTCG AAACACCAAT AAAGTACTTG AATTGTATGA GGGAGTGAGC
CTATTTTACC TTGGCTCATC GGCCAATGTA CGTATGGCCA CACCCGTTAT CAAAGAGGGT
GGTTCATACG GCGATCTATA TGGCTACAAA TGGAAAACGA TGAACGGTCA GTACGTGGTC
AACGCCAATG GTGTACCGGT AAAAACCGAC GCTATTGAAA AACTGGGCAA CTTCAACCCG
AAGTTCACCG CAGGCTTCAG CAACAATTTC ACCTACAAAA ACTGGAACCT GAACCTGCTC
ATCGACGGCA AGTTTGGCGG AATTGTAACT TCGGGCACAT CCGCTCAGAT GGCCTATGCG
GGCACTTCGG CCAGTACGAC AACCTTCCGG GAAGCCAACT CCTGGCTCAT TCCCGGTGTT
ACCCCCGAGG GTCAACCCAA TACAGTCTCC GTAAATGCAG AGAAATTTTG GCAAACCGTT
TCGCAGGGCG ACTACTCGTG GGGCGAGTTT TTCACCTACG ACGCCACCAA CGTTCGGGTA
CGTGAATTAA CGCTGGGCTA CAATTTTACC CGGCTGCCGG GATTCTTCAA AAACGCCCGC
CTATCGTTCG TAGCCCGCAA CCTGCTCTTC CTCTACCGGG GAAATGCCCT CCTCAACGTA
CCCGGCATTG GCAAACGGAA ACTTGATTTC GACCCCGAAG TGAGCTTTGG CAACAGCAAC
TTCCAGGGTG TGGAGTATTA TAACCTGCCA TCGACCCGAA ACATTGGTGT GAACCTCAAA
CTCTCTTTTT AA
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| Protein sequence | MKTQVKASVS FPDRSTGKHL RRVFRLTIFL LGIEGALGLM NLSTANQAFA QQVKQLTGRV
LDSQKNPVPG ATIVAKGSNT GVTTDADGKF TLSVSNTISS LVISYIGMTP QEIEVGNRSA
MGDIVLSESS MVLREVVVTA LGIERAAKTI TYSIQKLGGE QINEVRDANF TNTLSGKIAG
LTITPSANGP GGATRIVLRG NRSIQGSNNA LIVVDGVPID NSTPAGQVRS DAGGQSGSDG
ASSINPDDIE SLNVLKGAAG AALYGSRAAN GVIIITTKRG KSGKLDVNIN SGVTIDRALT
TPNLQNAYAQ GSGGTYSTLA SGSWGPAISG QSVTNWQGQT VNLQAYPDNI KDFFQTAVST
NNSVGVSGGS EKIQTYLSYS NNYINGIVPN NRLSRNTFNG RMSVDLTSRL SVDAKVTYML
QNIYDKPGVG GDGLVVANIF RIPRSVDPET LKSYKTVNVS GIETPTYWTT TDAVYMNPYW
TINNTHHDEN RSRVTGLLVM RYKLTDWLNI QGRVSSDSYN DFITQKYTNN TVNYARQPGG
FYSEGNDFIA ERNLDVLLTG TNRLTDDLKV NYNLGGSVLS RRLRHRVNAA DGLGFPNKYD
LSYATTLKVE AVTSKRELQS VYGTAQFAYR DYLFLDLTAR NDWSSTLPSP YAYFYPSVGI
SAILSEMVRM PAWISLGKVR ASVTKVGNDA SPYLLGQTYS YIRGGFGGYI ASSSTKAISD
LKPELTQSLE IGTEWGFYNN RLGLDLTYYK TNSQNQLLQV ASPASSGYST LNVNAGNIQN
SGVEVVLTAK PIVTKDFTWN IGLNYARNTN KVLELYEGVS LFYLGSSANV RMATPVIKEG
GSYGDLYGYK WKTMNGQYVV NANGVPVKTD AIEKLGNFNP KFTAGFSNNF TYKNWNLNLL
IDGKFGGIVT SGTSAQMAYA GTSASTTTFR EANSWLIPGV TPEGQPNTVS VNAEKFWQTV
SQGDYSWGEF FTYDATNVRV RELTLGYNFT RLPGFFKNAR LSFVARNLLF LYRGNALLNV
PGIGKRKLDF DPEVSFGNSN FQGVEYYNLP STRNIGVNLK LSF
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