Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0608 |
Symbol | |
ID | 8724336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 756832 |
End bp | 757575 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003385471 |
Protein GI | 284035541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0708885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAAT TTTCTGGACA GGTTGTCCTC GTTACCGGGG CTGCATCGGG AATCGGGTTA TCCATCGCAC GCAAATTACT CGGCGAAGGA GCCCGGGTCG GCCTGCTCGA CGCTAACGAA AGCGCCTTAC AAAACGCATT TGCCACTTAT GGCCCGGATG CGGTATTGAT TGGTATCGAC ATTACCGACG AAGGCCGGGT AGCCCAGGCC GTTACCCAGG TTCATGAGCA GTTTGGCAAG ATCGACGCCC TCATCAACTG TGTGGGTATT ACCGGCATCA CGAACGTGCA AAGTCATGAG GTGAGCAGCG AAAATCTGCA CAAGGTATTT GAGGTCAACT TCATGAGCAG TTTCTACACC TCGAAGGCAG TACTGCCCCT GATGCTGGCC CGTAATTATG GTCGCATCCT GCACATTGCC TCCATTGCGG GCAAAGAAGG AAACGCGGGT ATGCTGGCCT ACTCGGCCTC AAAAGCTGCC GTGATCTGCA TGGCTAAAGT GCAGGGGAAA GAATACGCCG AACGGGGCAT TACGGTCAAT GCCCTGGCAC CGGCAGTCAT TCAAACGCCA CTGGTCGACG CCATGCCCGA GGTGCAGGTC AAGTATATGA CGGATAAAAT CCCGATGAAA CGCTGTGGTA CGCTCGACGA AGCTGCGAAT CTGGCGGCCT ACATTGTATC GCCCAAAAAC AGTTTTACCA CCGGTTTCAC CTTCGACTTA TCGGGGGGCC GGGCAACCTA TTAG
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Protein sequence | MGEFSGQVVL VTGAASGIGL SIARKLLGEG ARVGLLDANE SALQNAFATY GPDAVLIGID ITDEGRVAQA VTQVHEQFGK IDALINCVGI TGITNVQSHE VSSENLHKVF EVNFMSSFYT SKAVLPLMLA RNYGRILHIA SIAGKEGNAG MLAYSASKAA VICMAKVQGK EYAERGITVN ALAPAVIQTP LVDAMPEVQV KYMTDKIPMK RCGTLDEAAN LAAYIVSPKN SFTTGFTFDL SGGRATY
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