Gene Slin_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0608 
Symbol 
ID8724336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp756832 
End bp757575 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content54% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003385471 
Protein GI284035541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0708885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAT TTTCTGGACA GGTTGTCCTC GTTACCGGGG CTGCATCGGG AATCGGGTTA 
TCCATCGCAC GCAAATTACT CGGCGAAGGA GCCCGGGTCG GCCTGCTCGA CGCTAACGAA
AGCGCCTTAC AAAACGCATT TGCCACTTAT GGCCCGGATG CGGTATTGAT TGGTATCGAC
ATTACCGACG AAGGCCGGGT AGCCCAGGCC GTTACCCAGG TTCATGAGCA GTTTGGCAAG
ATCGACGCCC TCATCAACTG TGTGGGTATT ACCGGCATCA CGAACGTGCA AAGTCATGAG
GTGAGCAGCG AAAATCTGCA CAAGGTATTT GAGGTCAACT TCATGAGCAG TTTCTACACC
TCGAAGGCAG TACTGCCCCT GATGCTGGCC CGTAATTATG GTCGCATCCT GCACATTGCC
TCCATTGCGG GCAAAGAAGG AAACGCGGGT ATGCTGGCCT ACTCGGCCTC AAAAGCTGCC
GTGATCTGCA TGGCTAAAGT GCAGGGGAAA GAATACGCCG AACGGGGCAT TACGGTCAAT
GCCCTGGCAC CGGCAGTCAT TCAAACGCCA CTGGTCGACG CCATGCCCGA GGTGCAGGTC
AAGTATATGA CGGATAAAAT CCCGATGAAA CGCTGTGGTA CGCTCGACGA AGCTGCGAAT
CTGGCGGCCT ACATTGTATC GCCCAAAAAC AGTTTTACCA CCGGTTTCAC CTTCGACTTA
TCGGGGGGCC GGGCAACCTA TTAG
 
Protein sequence
MGEFSGQVVL VTGAASGIGL SIARKLLGEG ARVGLLDANE SALQNAFATY GPDAVLIGID 
ITDEGRVAQA VTQVHEQFGK IDALINCVGI TGITNVQSHE VSSENLHKVF EVNFMSSFYT
SKAVLPLMLA RNYGRILHIA SIAGKEGNAG MLAYSASKAA VICMAKVQGK EYAERGITVN
ALAPAVIQTP LVDAMPEVQV KYMTDKIPMK RCGTLDEAAN LAAYIVSPKN SFTTGFTFDL
SGGRATY