| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0607 |
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| Symbol | |
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| ID | 8724335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 754601 |
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| End bp | 756700 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Glycoside hydrolase, family 20, catalytic core |
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| Protein accession | YP_003385470 |
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| Protein GI | 284035540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0569988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACGA GCAAATGCTC GCGCCAGAAT ACCATGAAAA GCCTCTGGAT CAGTTGTTTT
TTCGTTTATG GCTGGCTTGG CGTAGCCTCG GCGCAGCAGC GTGCTACCTT GCTGCCAGCC
CCGCAGTCTG TTCAGTATGG ACAGGGGGCG CTGCCGGTCC GGACCCTGAC CCTGTATGTG
GCCCCCAACG CATCGGCCGA TGTAGCTTTT GCCTTGAATG AACTTAAGAA TCTACTCACC
GAGCGCTCCG GCAAACCCGT ACAATCAGGT TCGTCCGCCA CGGCATCCAC GGTTCGGTAT
CTGGTCAGAA CAGCCGGGCA GGAGTTGCCG GGCACCCACG AGGCTACCAC TGGAAATACG
CGTGAGCAGT ATACGCTCAC GATTACCCGG AAAGGCATCG ACATTAACGC CCAAACCTCA
ACGGGTCTGT ACTACGCCGT GCAAACGATT CGCCAGTTGA TACAAGGACA GGGCCCACAG
GCTTTTCTGC CCTTTGTCAC GATCAGCGAT CAGCCCAAAC TGGCTTACCG CGGAGTGATG
ATGGACTTTG CGCATGGCGG TTTGCTGACG GTGGCCGAAA TCAAAAAGCA GATCGACTTT
CTGGCCCGCT GGAAAACCAA CCAATATTAT TTCTACAATG AGGTCAGCAT TCAGTTGGAA
GGATTCCCGA CCCTGAACTA CAAGGCAAGT TATTCGCAGG CCCAGATCAA ACACATTATC
GCCTACGCCC GCGAACGGCA TATAGACGTC ATTCCGTTCG TTAACTTCTA CGGGCACCTG
CACGAGCTGA TTCGCAACGA GAAATACGCG TCGCTGGGCA TCGGACAGTA CGGGCATGAA
CTGGACCCGC GTAACCCGGC CGTGCAGACA CTCCTCAAAA ACTGGATCAG GCAATACACG
AGCCTGTTCC AAAGCCCGTT CATTCACGTT GGCTTCGACG AAACCTGGGA AACCAAACGG
CTGGCCAATG CCGCCCCAAC CCGGCTGGAC CCCGAAGCGC TGTATAGTCA GCAACTTACG
TTCGTGAGCA ACGAGTTCAG GCAGTACGGC AAAACGCTGC TGGCCTGGAC AGACATGAAC
GCCTTTTACC CGAACGTTCT GGCCAAATTC CCCAAAGATG TCATCCCCGT TATCTGGGAA
TATTCGCCCG ATACGACGGC CATCAGCAAG TACCTGAATC CGGTTCTGAA AGAGCAGAAA
CCATTTTTTA TTCAGCCCGC CGTTTCTGGC TGGGGGCATG TTTACCCCGC TGCCGACTAT
ACCTACGAAA ATATAAATCT GTGCCTGAAA GCGGGCCTTC AGCACAACAC CCTGGGCTTT
ATCACCTCGG TCTGGACCGA CTCTGTCGAG CCGTTTGTCC GGGCATCCTG GCTCTTTATG
GCCTATGGCT GCATAGCTGC CTGGCAGGGT ACAGTACCCG ACAAAACCAC CTTTACCGGG
CACTATAGCT CGGTCGTTTA CCCATCGGTA GCACCGGATA TACAGGCGGC TTTCGACCAT
ATTGCCACCG CTGGTCAGTA CCTCGAAAAA TGCCTGGGAA AGAATACCCA GAGTATGCCC
AGGGGTACGC TCGTGGAAAG CTGGTCGAAT CCGTTTTCGG CTTATTACCT GGCAAATACA
ACCGAACACA AAGCCGACTT TCAGCAAGTT CGCACCCATA CCGAGGAGGC TCAGGAAAAG
CTGATCCAGG CCCTTAAGCA GGCAAATCCG TCCGATACCA GTTTCATTCA GTCGATGCTG
GTATCGGCCC GGCTGATCAA CTATTCGGCC AGTCGTTTTT TGTGGGCCAG AGCCATTGTA
GACCGCTGGA ACGATGGCAT GATAGCCCAA CCGAAGGATG ATTACGTATT CTATGATCTG
ACCTACCCGT GCCACAGCTT ACTAGTCGAT GCCATGGACG AAACGGGCGA ACTAAAACAA
GCGTACGCCC AGGCCTGGCT ATCGGAGAAT ATGCCGTACC GGCTGAACAC CATGCTGGGT
CGGTTCGATA CAGATTTCGG CCTTTGGCGG AAGCTCCATT TGAATGTGCT TGACTATAAG
ATTCAGAAAA AGACCGGCCC CCTACAATCC TTTGAGTTGA TGTTTACCCC TGATTTTTAG
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| Protein sequence | MGTSKCSRQN TMKSLWISCF FVYGWLGVAS AQQRATLLPA PQSVQYGQGA LPVRTLTLYV
APNASADVAF ALNELKNLLT ERSGKPVQSG SSATASTVRY LVRTAGQELP GTHEATTGNT
REQYTLTITR KGIDINAQTS TGLYYAVQTI RQLIQGQGPQ AFLPFVTISD QPKLAYRGVM
MDFAHGGLLT VAEIKKQIDF LARWKTNQYY FYNEVSIQLE GFPTLNYKAS YSQAQIKHII
AYARERHIDV IPFVNFYGHL HELIRNEKYA SLGIGQYGHE LDPRNPAVQT LLKNWIRQYT
SLFQSPFIHV GFDETWETKR LANAAPTRLD PEALYSQQLT FVSNEFRQYG KTLLAWTDMN
AFYPNVLAKF PKDVIPVIWE YSPDTTAISK YLNPVLKEQK PFFIQPAVSG WGHVYPAADY
TYENINLCLK AGLQHNTLGF ITSVWTDSVE PFVRASWLFM AYGCIAAWQG TVPDKTTFTG
HYSSVVYPSV APDIQAAFDH IATAGQYLEK CLGKNTQSMP RGTLVESWSN PFSAYYLANT
TEHKADFQQV RTHTEEAQEK LIQALKQANP SDTSFIQSML VSARLINYSA SRFLWARAIV
DRWNDGMIAQ PKDDYVFYDL TYPCHSLLVD AMDETGELKQ AYAQAWLSEN MPYRLNTMLG
RFDTDFGLWR KLHLNVLDYK IQKKTGPLQS FELMFTPDF
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